Protein–RNA interactions for Protein: O75339

CILP, Cartilage intermediate layer protein 1, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CILPO75339 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
CILPO75339 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CILPO75339 AC011477.6-201ENST00000604980 1927 ntBASIC17.13■□□□□ 0.33
CILPO75339 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CILPO75339 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CILPO75339 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.13■□□□□ 0.33
CILPO75339 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.13■□□□□ 0.33
CILPO75339 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CILPO75339 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CILPO75339 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CILPO75339 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CILPO75339 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.12■□□□□ 0.33
CILPO75339 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 CETN4P-206ENST00000642099 2168 ntBASIC17.12■□□□□ 0.33
CILPO75339 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.12■□□□□ 0.33
CILPO75339 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 MIR770-201ENST00000390219 98 ntBASIC17.12■□□□□ 0.33
CILPO75339 AL080243.2-201ENST00000418783 582 ntBASIC17.12■□□□□ 0.33
CILPO75339 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CILPO75339 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.12■□□□□ 0.33
CILPO75339 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CILPO75339 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.12■□□□□ 0.33
CILPO75339 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CILPO75339 AL158211.3-201ENST00000607385 239 ntBASIC17.12■□□□□ 0.33
CILPO75339 AC093512.1-201ENST00000617969 520 ntBASIC17.12■□□□□ 0.33
CILPO75339 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CILPO75339 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CILPO75339 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.12■□□□□ 0.33
CILPO75339 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CILPO75339 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CILPO75339 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CILPO75339 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.12■□□□□ 0.33
CILPO75339 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.11■□□□□ 0.33
CILPO75339 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CILPO75339 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.11■□□□□ 0.33
CILPO75339 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.11■□□□□ 0.33
CILPO75339 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CILPO75339 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.11■□□□□ 0.33
CILPO75339 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.11■□□□□ 0.33
CILPO75339 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CILPO75339 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CILPO75339 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CILPO75339 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CILPO75339 LINC02199-201ENST00000506655 2702 ntBASIC17.11■□□□□ 0.33
CILPO75339 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CILPO75339 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.11■□□□□ 0.33
CILPO75339 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CILPO75339 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CILPO75339 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CILPO75339 RPL37AP1-201ENST00000412502 279 ntBASIC17.11■□□□□ 0.33
CILPO75339 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CILPO75339 AC092580.3-201ENST00000430932 139 ntBASIC17.11■□□□□ 0.33
CILPO75339 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CILPO75339 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CILPO75339 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.11■□□□□ 0.33
CILPO75339 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CILPO75339 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.11■□□□□ 0.33
CILPO75339 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.11■□□□□ 0.33
CILPO75339 AL138828.2-201ENST00000615812 383 ntBASIC17.11■□□□□ 0.33
CILPO75339 AC073592.8-201ENST00000624126 511 ntBASIC17.11■□□□□ 0.33
CILPO75339 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CILPO75339 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CILPO75339 KRT8P12-202ENST00000472924 1397 ntBASIC17.11■□□□□ 0.33
CILPO75339 FO538757.1-201ENST00000623083 1397 ntBASIC17.11■□□□□ 0.33
CILPO75339 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CILPO75339 TNRC18P3-201ENST00000441896 2691 ntBASIC17.11■□□□□ 0.33
CILPO75339 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CILPO75339 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.11■□□□□ 0.33
CILPO75339 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CILPO75339 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CILPO75339 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CILPO75339 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CILPO75339 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.1■□□□□ 0.33
CILPO75339 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
CILPO75339 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CILPO75339 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CILPO75339 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CILPO75339 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms