Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GFRA3O60609 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GFRA3O60609 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
GFRA3O60609 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
GFRA3O60609 IGLV3-15-201ENST00000518356 244 ntBASIC15.52■□□□□ 0.08
GFRA3O60609 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.52■□□□□ 0.08
GFRA3O60609 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GFRA3O60609 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.52■□□□□ 0.08
GFRA3O60609 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.52■□□□□ 0.08
GFRA3O60609 PPY2P-201ENST00000582808 702 ntBASIC15.52■□□□□ 0.08
GFRA3O60609 AF254983.2-201ENST00000612331 135 ntBASIC15.52■□□□□ 0.08
GFRA3O60609 AL805961.1-201ENST00000642026 753 ntBASIC15.52■□□□□ 0.08
GFRA3O60609 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
GFRA3O60609 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.52■□□□□ 0.07
GFRA3O60609 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
GFRA3O60609 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.52■□□□□ 0.07
GFRA3O60609 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GFRA3O60609 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.52■□□□□ 0.07
GFRA3O60609 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GFRA3O60609 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
GFRA3O60609 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFRA3O60609 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.51■□□□□ 0.07
GFRA3O60609 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFRA3O60609 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFRA3O60609 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFRA3O60609 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFRA3O60609 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GFRA3O60609 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.51■□□□□ 0.07
GFRA3O60609 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.51■□□□□ 0.07
GFRA3O60609 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GFRA3O60609 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFRA3O60609 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.51■□□□□ 0.07
GFRA3O60609 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.51■□□□□ 0.07
GFRA3O60609 AL139008.1-201ENST00000437894 228 ntBASIC15.51■□□□□ 0.07
GFRA3O60609 CNN2P10-201ENST00000443067 918 ntBASIC15.51■□□□□ 0.07
GFRA3O60609 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GFRA3O60609 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.51■□□□□ 0.07
GFRA3O60609 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.51■□□□□ 0.07
GFRA3O60609 AC005740.2-201ENST00000511085 419 ntBASIC15.51■□□□□ 0.07
GFRA3O60609 AP001582.1-201ENST00000525856 295 ntBASIC15.51■□□□□ 0.07
GFRA3O60609 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFRA3O60609 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.51■□□□□ 0.07
GFRA3O60609 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.51■□□□□ 0.07
GFRA3O60609 AC087045.2-201ENST00000606279 1003 ntBASIC15.51■□□□□ 0.07
GFRA3O60609 AL645939.5-201ENST00000606834 243 ntBASIC15.51■□□□□ 0.07
GFRA3O60609 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GFRA3O60609 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFRA3O60609 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC15.51■□□□□ 0.07
GFRA3O60609 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
GFRA3O60609 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFRA3O60609 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
GFRA3O60609 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
GFRA3O60609 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
GFRA3O60609 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFRA3O60609 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.51■□□□□ 0.07
GFRA3O60609 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GFRA3O60609 AL023775.1-201ENST00000454907 1746 ntBASIC15.51■□□□□ 0.07
GFRA3O60609 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
GFRA3O60609 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
GFRA3O60609 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GFRA3O60609 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
GFRA3O60609 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.5■□□□□ 0.07
GFRA3O60609 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GFRA3O60609 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.5■□□□□ 0.07
GFRA3O60609 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GFRA3O60609 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.5■□□□□ 0.07
GFRA3O60609 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GFRA3O60609 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.5■□□□□ 0.07
GFRA3O60609 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.5■□□□□ 0.07
GFRA3O60609 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GFRA3O60609 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.5■□□□□ 0.07
GFRA3O60609 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GFRA3O60609 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GFRA3O60609 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GFRA3O60609 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
GFRA3O60609 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GFRA3O60609 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
GFRA3O60609 AL512430.1-201ENST00000392575 860 ntBASIC15.5■□□□□ 0.07
GFRA3O60609 TOMM22P5-201ENST00000416399 439 ntBASIC15.5■□□□□ 0.07
GFRA3O60609 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
GFRA3O60609 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GFRA3O60609 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.5■□□□□ 0.07
GFRA3O60609 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
GFRA3O60609 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.5■□□□□ 0.07
GFRA3O60609 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
GFRA3O60609 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.5■□□□□ 0.07
GFRA3O60609 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.5■□□□□ 0.07
GFRA3O60609 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.5■□□□□ 0.07
GFRA3O60609 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GFRA3O60609 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.5■□□□□ 0.07
GFRA3O60609 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.5■□□□□ 0.07
GFRA3O60609 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GFRA3O60609 REXO1L8P-201ENST00000604378 1897 ntBASIC15.5■□□□□ 0.07
GFRA3O60609 KRT8P39-201ENST00000396270 1433 ntBASIC15.5■□□□□ 0.07
GFRA3O60609 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GFRA3O60609 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GFRA3O60609 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GFRA3O60609 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.5■□□□□ 0.07
GFRA3O60609 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
GFRA3O60609 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms