Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.43□□□□□ -0.1
GMDSO60547 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.43□□□□□ -0.1
GMDSO60547 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.43□□□□□ -0.1
GMDSO60547 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.43□□□□□ -0.1
GMDSO60547 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.43□□□□□ -0.1
GMDSO60547 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.43□□□□□ -0.1
GMDSO60547 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
GMDSO60547 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
GMDSO60547 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.43□□□□□ -0.1
GMDSO60547 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
GMDSO60547 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.43□□□□□ -0.1
GMDSO60547 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.43□□□□□ -0.1
GMDSO60547 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
GMDSO60547 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.42□□□□□ -0.1
GMDSO60547 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
GMDSO60547 SNX33P1-201ENST00000592116 1762 ntBASIC14.42□□□□□ -0.1
GMDSO60547 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
GMDSO60547 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.42□□□□□ -0.1
GMDSO60547 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.42□□□□□ -0.1
GMDSO60547 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.42□□□□□ -0.1
GMDSO60547 AC131009.4-201ENST00000624048 1740 ntBASIC14.42□□□□□ -0.1
GMDSO60547 CICP14-201ENST00000629111 2732 ntBASIC14.42□□□□□ -0.1
GMDSO60547 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.42□□□□□ -0.1
GMDSO60547 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.42□□□□□ -0.1
GMDSO60547 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.42□□□□□ -0.1
GMDSO60547 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.42□□□□□ -0.1
GMDSO60547 FDX1P1-201ENST00000449115 551 ntBASIC14.42□□□□□ -0.1
GMDSO60547 AC108751.1-201ENST00000490852 363 ntBASIC14.42□□□□□ -0.1
GMDSO60547 IGHV3-22-201ENST00000520721 359 ntBASIC14.42□□□□□ -0.1
GMDSO60547 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.42□□□□□ -0.1
GMDSO60547 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.42□□□□□ -0.1
GMDSO60547 AC005412.3-201ENST00000580309 715 ntBASIC14.42□□□□□ -0.1
GMDSO60547 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.42□□□□□ -0.1
GMDSO60547 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
GMDSO60547 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 AC010654.1-201ENST00000615722 808 ntBASIC14.42□□□□□ -0.1
GMDSO60547 AC004790.2-201ENST00000623588 572 ntBASIC14.42□□□□□ -0.1
GMDSO60547 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.42□□□□□ -0.1
GMDSO60547 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
GMDSO60547 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.42□□□□□ -0.1
GMDSO60547 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.42□□□□□ -0.1
GMDSO60547 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
GMDSO60547 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GMDSO60547 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
GMDSO60547 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
GMDSO60547 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.41□□□□□ -0.1
GMDSO60547 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GMDSO60547 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.41□□□□□ -0.1
GMDSO60547 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
GMDSO60547 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.41□□□□□ -0.1
GMDSO60547 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
GMDSO60547 AL122018.1-201ENST00000446607 2310 ntBASIC14.41□□□□□ -0.1
GMDSO60547 AL671710.1-201ENST00000610245 2349 ntBASIC14.41□□□□□ -0.1
GMDSO60547 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GMDSO60547 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
GMDSO60547 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GMDSO60547 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.41□□□□□ -0.1
GMDSO60547 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms