Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA12O60330 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA12O60330 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA12O60330 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA12O60330 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGA12O60330 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA12O60330 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA12O60330 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA12O60330 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA12O60330 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGA12O60330 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGA12O60330 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA12O60330 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA12O60330 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA12O60330 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA12O60330 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA12O60330 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA12O60330 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA12O60330 RNA5SP410-201ENST00000516285 106 ntBASIC16.07■□□□□ 0.16
PCDHGA12O60330 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 AC124947.2-201ENST00000547118 1133 ntBASIC16.07■□□□□ 0.16
PCDHGA12O60330 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 AC013467.2-201ENST00000605472 835 ntBASIC16.07■□□□□ 0.16
PCDHGA12O60330 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA12O60330 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA12O60330 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.07■□□□□ 0.16
PCDHGA12O60330 AC092053.1-201ENST00000605787 1936 ntBASIC16.07■□□□□ 0.16
PCDHGA12O60330 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGA12O60330 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA12O60330 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA12O60330 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA12O60330 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA12O60330 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 AL391005.1-201ENST00000623953 2435 ntBASIC16.06■□□□□ 0.16
PCDHGA12O60330 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 GIMAP3P-201ENST00000495150 836 ntBASIC16.06■□□□□ 0.16
PCDHGA12O60330 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA12O60330 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA12O60330 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms