Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.28□□□□□ -0.28
SSSCA1O60232 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SSSCA1O60232 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.28□□□□□ -0.28
SSSCA1O60232 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SSSCA1O60232 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.28□□□□□ -0.28
SSSCA1O60232 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.28□□□□□ -0.28
SSSCA1O60232 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SSSCA1O60232 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
SSSCA1O60232 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SSSCA1O60232 AC087481.3-201ENST00000602886 1894 ntBASIC13.28□□□□□ -0.28
SSSCA1O60232 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.28□□□□□ -0.28
SSSCA1O60232 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.28□□□□□ -0.28
SSSCA1O60232 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SSSCA1O60232 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.28□□□□□ -0.28
SSSCA1O60232 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.28□□□□□ -0.28
SSSCA1O60232 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.28□□□□□ -0.28
SSSCA1O60232 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SSSCA1O60232 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.28□□□□□ -0.28
SSSCA1O60232 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.28□□□□□ -0.28
SSSCA1O60232 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.28□□□□□ -0.28
SSSCA1O60232 AC114341.1-201ENST00000618070 349 ntBASIC13.28□□□□□ -0.28
SSSCA1O60232 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.28□□□□□ -0.28
SSSCA1O60232 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SSSCA1O60232 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SSSCA1O60232 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.28□□□□□ -0.28
SSSCA1O60232 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
SSSCA1O60232 NCF1C-201ENST00000438382 1427 ntBASIC13.28□□□□□ -0.28
SSSCA1O60232 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.28□□□□□ -0.28
SSSCA1O60232 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.28□□□□□ -0.28
SSSCA1O60232 NSUN5P1-202ENST00000421140 1535 ntBASIC13.28□□□□□ -0.28
SSSCA1O60232 NSUN5P2-203ENST00000457352 1529 ntBASIC13.28□□□□□ -0.28
SSSCA1O60232 AL592424.1-201ENST00000563624 1536 ntBASIC13.28□□□□□ -0.28
SSSCA1O60232 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.28□□□□□ -0.28
SSSCA1O60232 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.28□□□□□ -0.28
SSSCA1O60232 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSSCA1O60232 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSSCA1O60232 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.27□□□□□ -0.28
SSSCA1O60232 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.27□□□□□ -0.28
SSSCA1O60232 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSSCA1O60232 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.27□□□□□ -0.28
SSSCA1O60232 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSSCA1O60232 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSSCA1O60232 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.27□□□□□ -0.28
SSSCA1O60232 SNX18-202ENST00000343017 3140 ntBASIC13.27□□□□□ -0.28
SSSCA1O60232 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
SSSCA1O60232 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSSCA1O60232 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSSCA1O60232 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSSCA1O60232 AC106881.1-201ENST00000605849 3329 ntBASIC13.27□□□□□ -0.28
SSSCA1O60232 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSSCA1O60232 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSSCA1O60232 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSSCA1O60232 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SSSCA1O60232 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSSCA1O60232 AL596275.1-201ENST00000423464 877 ntBASIC13.27□□□□□ -0.29
SSSCA1O60232 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.27□□□□□ -0.29
SSSCA1O60232 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.27□□□□□ -0.29
SSSCA1O60232 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.27□□□□□ -0.29
SSSCA1O60232 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSSCA1O60232 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.27□□□□□ -0.29
SSSCA1O60232 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SSSCA1O60232 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.27□□□□□ -0.29
SSSCA1O60232 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.27□□□□□ -0.29
SSSCA1O60232 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
SSSCA1O60232 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.27□□□□□ -0.29
SSSCA1O60232 AL121672.3-201ENST00000608644 468 ntBASIC13.27□□□□□ -0.29
SSSCA1O60232 PGM5P2-202ENST00000637225 1043 ntBASIC13.27□□□□□ -0.29
SSSCA1O60232 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.27□□□□□ -0.29
SSSCA1O60232 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSSCA1O60232 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSSCA1O60232 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.27□□□□□ -0.29
SSSCA1O60232 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSSCA1O60232 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSSCA1O60232 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SSSCA1O60232 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.27□□□□□ -0.29
SSSCA1O60232 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SSSCA1O60232 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SSSCA1O60232 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.27□□□□□ -0.29
SSSCA1O60232 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.27□□□□□ -0.29
SSSCA1O60232 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSSCA1O60232 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSSCA1O60232 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms