Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP2AO43633 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.22■□□□□ 0.51
CHMP2AO43633 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP2AO43633 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.22■□□□□ 0.51
CHMP2AO43633 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CHMP2AO43633 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP2AO43633 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.21■□□□□ 0.51
CHMP2AO43633 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.21■□□□□ 0.51
CHMP2AO43633 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
CHMP2AO43633 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.21■□□□□ 0.51
CHMP2AO43633 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.21■□□□□ 0.51
CHMP2AO43633 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.21■□□□□ 0.51
CHMP2AO43633 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.21■□□□□ 0.51
CHMP2AO43633 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.21■□□□□ 0.51
CHMP2AO43633 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CHMP2AO43633 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.21■□□□□ 0.51
CHMP2AO43633 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.21■□□□□ 0.51
CHMP2AO43633 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP2AO43633 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.21■□□□□ 0.51
CHMP2AO43633 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.21■□□□□ 0.51
CHMP2AO43633 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CHMP2AO43633 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.5
CHMP2AO43633 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.2■□□□□ 0.5
CHMP2AO43633 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CHMP2AO43633 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.2■□□□□ 0.5
CHMP2AO43633 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.2■□□□□ 0.5
CHMP2AO43633 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP2AO43633 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHMP2AO43633 CETN4P-206ENST00000642099 2168 ntBASIC18.2■□□□□ 0.5
CHMP2AO43633 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 AL118508.1-201ENST00000613502 2345 ntBASIC18.2■□□□□ 0.5
CHMP2AO43633 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.2■□□□□ 0.5
CHMP2AO43633 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.2■□□□□ 0.5
CHMP2AO43633 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CHMP2AO43633 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.2■□□□□ 0.5
CHMP2AO43633 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.2■□□□□ 0.5
CHMP2AO43633 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP2AO43633 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP2AO43633 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHMP2AO43633 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHMP2AO43633 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.2■□□□□ 0.5
CHMP2AO43633 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.2■□□□□ 0.5
CHMP2AO43633 AC011467.4-201ENST00000594891 528 ntBASIC18.2■□□□□ 0.5
CHMP2AO43633 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.2■□□□□ 0.5
CHMP2AO43633 AL133215.2-201ENST00000609242 977 ntBASIC18.2■□□□□ 0.5
CHMP2AO43633 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CHMP2AO43633 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
CHMP2AO43633 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.2■□□□□ 0.5
CHMP2AO43633 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CHMP2AO43633 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.2■□□□□ 0.5
CHMP2AO43633 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CHMP2AO43633 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CHMP2AO43633 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 LINC02199-201ENST00000506655 2702 ntBASIC18.2■□□□□ 0.5
CHMP2AO43633 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHMP2AO43633 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP2AO43633 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP2AO43633 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP2AO43633 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2AO43633 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2AO43633 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CHMP2AO43633 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2AO43633 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP2AO43633 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2AO43633 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP2AO43633 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CHMP2AO43633 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2AO43633 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms