Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
MID1O15344 AC011676.5-201ENST00000624864 2660 ntBASIC16.17■□□□□ 0.18
MID1O15344 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MID1O15344 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.17■□□□□ 0.18
MID1O15344 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.17■□□□□ 0.18
MID1O15344 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.17■□□□□ 0.18
MID1O15344 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.17■□□□□ 0.18
MID1O15344 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.17■□□□□ 0.18
MID1O15344 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.17■□□□□ 0.18
MID1O15344 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.17■□□□□ 0.18
MID1O15344 AC093004.1-201ENST00000508850 424 ntBASIC16.17■□□□□ 0.18
MID1O15344 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.17■□□□□ 0.18
MID1O15344 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.17■□□□□ 0.18
MID1O15344 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.17■□□□□ 0.18
MID1O15344 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.17■□□□□ 0.18
MID1O15344 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
MID1O15344 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.17■□□□□ 0.18
MID1O15344 SRD5A3P1-201ENST00000603021 949 ntBASIC16.17■□□□□ 0.18
MID1O15344 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.17■□□□□ 0.18
MID1O15344 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
MID1O15344 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
MID1O15344 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
MID1O15344 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.17■□□□□ 0.18
MID1O15344 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MID1O15344 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.17■□□□□ 0.18
MID1O15344 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
MID1O15344 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.17■□□□□ 0.18
MID1O15344 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MID1O15344 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.17■□□□□ 0.18
MID1O15344 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.16■□□□□ 0.18
MID1O15344 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.16■□□□□ 0.18
MID1O15344 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
MID1O15344 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
MID1O15344 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.16■□□□□ 0.18
MID1O15344 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
MID1O15344 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 HIST3H2BA-201ENST00000436555 524 ntBASIC16.16■□□□□ 0.18
MID1O15344 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.16■□□□□ 0.18
MID1O15344 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.16■□□□□ 0.18
MID1O15344 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.16■□□□□ 0.18
MID1O15344 AL589987.1-201ENST00000453380 819 ntBASIC16.16■□□□□ 0.18
MID1O15344 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.16■□□□□ 0.18
MID1O15344 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.16■□□□□ 0.18
MID1O15344 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.16■□□□□ 0.18
MID1O15344 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.16■□□□□ 0.18
MID1O15344 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.16■□□□□ 0.18
MID1O15344 CR383656.12-201ENST00000549567 513 ntBASIC16.16■□□□□ 0.18
MID1O15344 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
MID1O15344 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.16■□□□□ 0.18
MID1O15344 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.16■□□□□ 0.18
MID1O15344 CHCHD2P3-201ENST00000603038 451 ntBASIC16.16■□□□□ 0.18
MID1O15344 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.16■□□□□ 0.18
MID1O15344 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.16■□□□□ 0.18
MID1O15344 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MID1O15344 REXO1L8P-201ENST00000604378 1897 ntBASIC16.16■□□□□ 0.18
MID1O15344 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.16■□□□□ 0.18
MID1O15344 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.16■□□□□ 0.18
MID1O15344 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MID1O15344 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
MID1O15344 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MID1O15344 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.15■□□□□ 0.18
MID1O15344 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms