Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC25.51■■□□□ 1.67
CHD1O14646 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CHD1O14646 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC25.51■■□□□ 1.67
CHD1O14646 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC25.51■■□□□ 1.67
CHD1O14646 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CHD1O14646 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CHD1O14646 SYT17-208ENST00000568433 812 ntTSL 3 BASIC25.51■■□□□ 1.67
CHD1O14646 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CHD1O14646 ZACNP1-201ENST00000612259 710 ntBASIC25.51■■□□□ 1.67
CHD1O14646 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC25.51■■□□□ 1.67
CHD1O14646 RPL35-206ENST00000629845 340 ntTSL 5 BASIC25.51■■□□□ 1.67
CHD1O14646 CASP16P-204ENST00000635032 809 ntBASIC25.51■■□□□ 1.67
CHD1O14646 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC25.51■■□□□ 1.67
CHD1O14646 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC25.51■■□□□ 1.67
CHD1O14646 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC25.51■■□□□ 1.67
CHD1O14646 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
CHD1O14646 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC25.5■■□□□ 1.67
CHD1O14646 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHD1O14646 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC25.5■■□□□ 1.67
CHD1O14646 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
CHD1O14646 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC25.5■■□□□ 1.67
CHD1O14646 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
CHD1O14646 AC097065.1-201ENST00000425737 517 ntBASIC25.5■■□□□ 1.67
CHD1O14646 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CHD1O14646 AL391280.1-201ENST00000506969 1062 ntBASIC25.5■■□□□ 1.67
CHD1O14646 PXK-206ENST00000463280 2825 ntTSL 2 BASIC25.5■■□□□ 1.67
CHD1O14646 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHD1O14646 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHD1O14646 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC25.5■■□□□ 1.67
CHD1O14646 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHD1O14646 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CHD1O14646 AC148477.4-201ENST00000613430 1793 ntBASIC25.5■■□□□ 1.67
CHD1O14646 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CHD1O14646 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CHD1O14646 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CHD1O14646 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CHD1O14646 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC25.49■■□□□ 1.67
CHD1O14646 CSH2-206ENST00000560142 749 ntTSL 5 BASIC25.49■■□□□ 1.67
CHD1O14646 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC25.49■■□□□ 1.67
CHD1O14646 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC25.49■■□□□ 1.67
CHD1O14646 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CHD1O14646 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CHD1O14646 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CHD1O14646 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC25.49■■□□□ 1.67
CHD1O14646 AL592424.1-201ENST00000563624 1536 ntBASIC25.49■■□□□ 1.67
CHD1O14646 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC25.49■■□□□ 1.67
CHD1O14646 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CHD1O14646 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CHD1O14646 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC25.49■■□□□ 1.67
CHD1O14646 AC008764.6-201ENST00000595909 2069 ntBASIC25.49■■□□□ 1.67
CHD1O14646 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CHD1O14646 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CHD1O14646 DPM3-202ENST00000368399 517 ntBASIC25.49■■□□□ 1.67
CHD1O14646 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC25.49■■□□□ 1.67
CHD1O14646 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC25.49■■□□□ 1.67
CHD1O14646 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC25.49■■□□□ 1.67
CHD1O14646 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC25.49■■□□□ 1.67
CHD1O14646 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CHD1O14646 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
CHD1O14646 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CHD1O14646 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CHD1O14646 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC25.48■■□□□ 1.67
CHD1O14646 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CHD1O14646 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CHD1O14646 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
CHD1O14646 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CHD1O14646 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC25.48■■□□□ 1.67
CHD1O14646 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CHD1O14646 AC098818.2-201ENST00000564925 2320 ntBASIC25.48■■□□□ 1.67
CHD1O14646 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
CHD1O14646 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CHD1O14646 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CHD1O14646 AL353637.1-201ENST00000451571 732 ntBASIC25.48■■□□□ 1.67
CHD1O14646 AC005740.2-201ENST00000511085 419 ntBASIC25.48■■□□□ 1.67
CHD1O14646 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC25.48■■□□□ 1.67
CHD1O14646 UBL5-208ENST00000593087 320 ntTSL 3 BASIC25.48■■□□□ 1.67
CHD1O14646 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC25.48■■□□□ 1.67
CHD1O14646 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CHD1O14646 AC025271.4-201ENST00000621477 1726 ntBASIC25.47■■□□□ 1.67
CHD1O14646 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC25.47■■□□□ 1.67
CHD1O14646 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHD1O14646 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CHD1O14646 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CHD1O14646 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHD1O14646 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC25.47■■□□□ 1.67
CHD1O14646 HLA-A-202ENST00000376806 1854 ntBASIC25.47■■□□□ 1.67
CHD1O14646 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC25.47■■□□□ 1.67
CHD1O14646 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CHD1O14646 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHD1O14646 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CHD1O14646 AC011742.3-201ENST00000439053 820 ntBASIC25.47■■□□□ 1.67
CHD1O14646 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC25.47■■□□□ 1.67
CHD1O14646 AL805961.1-201ENST00000642026 753 ntBASIC25.47■■□□□ 1.67
CHD1O14646 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHD1O14646 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC25.47■■□□□ 1.67
CHD1O14646 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHD1O14646 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHD1O14646 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC25.47■■□□□ 1.67
CHD1O14646 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
CHD1O14646 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms