Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
O00370 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
O00370 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
O00370 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.3■□□□□ 0.36
O00370 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
O00370 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.3■□□□□ 0.36
O00370 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
O00370 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.3■□□□□ 0.36
O00370 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
O00370 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.3■□□□□ 0.36
O00370 RPS8P6-201ENST00000426177 609 ntBASIC17.3■□□□□ 0.36
O00370 AC023141.5-201ENST00000458585 616 ntBASIC17.3■□□□□ 0.36
O00370 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.3■□□□□ 0.36
O00370 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.3■□□□□ 0.36
O00370 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
O00370 SNHG9-202ENST00000564014 471 ntBASIC17.3■□□□□ 0.36
O00370 AC009093.7-201ENST00000623853 1223 ntBASIC17.3■□□□□ 0.36
O00370 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
O00370 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.3■□□□□ 0.36
O00370 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
O00370 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.3■□□□□ 0.36
O00370 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.3■□□□□ 0.36
O00370 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.3■□□□□ 0.36
O00370 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
O00370 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.3■□□□□ 0.36
O00370 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.3■□□□□ 0.36
O00370 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.3■□□□□ 0.36
O00370 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
O00370 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.3■□□□□ 0.36
O00370 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
O00370 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.3■□□□□ 0.36
O00370 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.3■□□□□ 0.36
O00370 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
O00370 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
O00370 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.29■□□□□ 0.36
O00370 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
O00370 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 FAM220BP-201ENST00000377689 816 ntBASIC17.29■□□□□ 0.36
O00370 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.29■□□□□ 0.36
O00370 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
O00370 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.29■□□□□ 0.36
O00370 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 AP001160.2-201ENST00000596071 487 ntBASIC17.29■□□□□ 0.36
O00370 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.29■□□□□ 0.36
O00370 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
O00370 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.29■□□□□ 0.36
O00370 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.29■□□□□ 0.36
O00370 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.29■□□□□ 0.36
O00370 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.29■□□□□ 0.36
O00370 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
O00370 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 AL603832.2-201ENST00000566195 2125 ntBASIC17.29■□□□□ 0.36
O00370 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
O00370 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.29■□□□□ 0.36
O00370 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
O00370 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.28■□□□□ 0.36
O00370 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
O00370 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
O00370 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
O00370 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
O00370 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
O00370 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
O00370 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
O00370 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
O00370 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
O00370 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.28■□□□□ 0.36
O00370 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
O00370 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.28■□□□□ 0.36
O00370 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
O00370 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
O00370 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.28■□□□□ 0.36
O00370 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.28■□□□□ 0.36
O00370 AL365330.1-201ENST00000607459 531 ntBASIC17.28■□□□□ 0.36
O00370 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.28■□□□□ 0.36
O00370 AC079781.4-201ENST00000641908 219 ntBASIC17.28■□□□□ 0.36
O00370 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
O00370 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
O00370 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.28■□□□□ 0.36
O00370 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.28■□□□□ 0.36
O00370 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.28■□□□□ 0.36
O00370 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.28■□□□□ 0.36
O00370 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms