Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SBNO1A3KN83 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SBNO1A3KN83 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SBNO1A3KN83 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SBNO1A3KN83 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SBNO1A3KN83 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SBNO1A3KN83 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SBNO1A3KN83 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SBNO1A3KN83 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SBNO1A3KN83 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SBNO1A3KN83 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SBNO1A3KN83 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC21.62■■□□□ 1.05
SBNO1A3KN83 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC21.62■■□□□ 1.05
SBNO1A3KN83 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC21.62■■□□□ 1.05
SBNO1A3KN83 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC21.62■■□□□ 1.05
SBNO1A3KN83 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SBNO1A3KN83 AL118558.3-201ENST00000607414 1079 ntBASIC21.62■■□□□ 1.05
SBNO1A3KN83 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SBNO1A3KN83 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SBNO1A3KN83 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC21.62■■□□□ 1.05
SBNO1A3KN83 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SBNO1A3KN83 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SBNO1A3KN83 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SBNO1A3KN83 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC21.62■■□□□ 1.05
SBNO1A3KN83 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.62■■□□□ 1.05
SBNO1A3KN83 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SBNO1A3KN83 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC21.62■■□□□ 1.05
SBNO1A3KN83 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SBNO1A3KN83 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
SBNO1A3KN83 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC21.62■■□□□ 1.05
SBNO1A3KN83 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SBNO1A3KN83 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SBNO1A3KN83 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SBNO1A3KN83 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SBNO1A3KN83 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC21.61■■□□□ 1.05
SBNO1A3KN83 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SBNO1A3KN83 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SBNO1A3KN83 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SBNO1A3KN83 AL592424.1-201ENST00000563624 1536 ntBASIC21.61■■□□□ 1.05
SBNO1A3KN83 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SBNO1A3KN83 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
SBNO1A3KN83 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SBNO1A3KN83 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SBNO1A3KN83 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SBNO1A3KN83 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SBNO1A3KN83 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC21.61■■□□□ 1.05
SBNO1A3KN83 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SBNO1A3KN83 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SBNO1A3KN83 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SBNO1A3KN83 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SBNO1A3KN83 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SBNO1A3KN83 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SBNO1A3KN83 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SBNO1A3KN83 MIR326-201ENST00000362220 95 ntBASIC21.61■■□□□ 1.05
SBNO1A3KN83 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SBNO1A3KN83 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC21.61■■□□□ 1.05
SBNO1A3KN83 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC21.61■■□□□ 1.05
SBNO1A3KN83 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC21.61■■□□□ 1.05
SBNO1A3KN83 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SBNO1A3KN83 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SBNO1A3KN83 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SBNO1A3KN83 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SBNO1A3KN83 BNIP3P1-202ENST00000550043 1585 ntBASIC21.6■■□□□ 1.05
SBNO1A3KN83 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC21.6■■□□□ 1.05
SBNO1A3KN83 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SBNO1A3KN83 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC21.6■■□□□ 1.05
SBNO1A3KN83 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SBNO1A3KN83 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SBNO1A3KN83 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SBNO1A3KN83 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SBNO1A3KN83 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SBNO1A3KN83 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.6■■□□□ 1.05
SBNO1A3KN83 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SBNO1A3KN83 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SBNO1A3KN83 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SBNO1A3KN83 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SBNO1A3KN83 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SBNO1A3KN83 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC21.6■■□□□ 1.05
SBNO1A3KN83 TEX30-203ENST00000376022 828 ntTSL 2 BASIC21.6■■□□□ 1.05
SBNO1A3KN83 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SBNO1A3KN83 AC136604.1-201ENST00000418535 575 ntBASIC21.6■■□□□ 1.05
SBNO1A3KN83 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC21.6■■□□□ 1.05
SBNO1A3KN83 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC21.6■■□□□ 1.05
SBNO1A3KN83 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.6■■□□□ 1.05
SBNO1A3KN83 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
SBNO1A3KN83 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.6■■□□□ 1.05
SBNO1A3KN83 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SBNO1A3KN83 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC21.6■■□□□ 1.05
SBNO1A3KN83 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC21.6■■□□□ 1.05
SBNO1A3KN83 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC21.6■■□□□ 1.05
SBNO1A3KN83 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC21.6■■□□□ 1.05
SBNO1A3KN83 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC21.6■■□□□ 1.05
SBNO1A3KN83 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SBNO1A3KN83 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SBNO1A3KN83 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SBNO1A3KN83 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms