Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 RBM17P3-201ENST00000417687 1192 ntBASIC17.66■□□□□ 0.42
CCDC66A2RUB6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 AC138894.3-201ENST00000603787 634 ntBASIC17.66■□□□□ 0.42
CCDC66A2RUB6 AC064862.7-201ENST00000604520 867 ntBASIC17.66■□□□□ 0.42
CCDC66A2RUB6 AL589182.2-201ENST00000619332 1049 ntBASIC17.66■□□□□ 0.42
CCDC66A2RUB6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC66A2RUB6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 NKAPP1-205ENST00000585790 367 ntBASIC17.65■□□□□ 0.42
CCDC66A2RUB6 AL139424.1-201ENST00000607572 797 ntBASIC17.65■□□□□ 0.42
CCDC66A2RUB6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC66A2RUB6 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC66A2RUB6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC66A2RUB6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC66A2RUB6 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC66A2RUB6 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC66A2RUB6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 AC079781.5-202ENST00000641784 3743 ntBASIC17.64■□□□□ 0.41
CCDC66A2RUB6 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms