Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 FAM86EP-206ENST00000510506 987 ntBASIC14.15□□□□□ -0.14
SHISA3A0PJX4 AC106795.1-205ENST00000512851 1056 ntBASIC14.15□□□□□ -0.14
SHISA3A0PJX4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 AC099336.1-202ENST00000602961 463 ntBASIC14.15□□□□□ -0.14
SHISA3A0PJX4 AL121956.5-201ENST00000625261 221 ntBASIC14.15□□□□□ -0.14
SHISA3A0PJX4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 FER1L4-210ENST00000615531 5998 ntBASIC14.15□□□□□ -0.14
SHISA3A0PJX4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.14□□□□□ -0.15
SHISA3A0PJX4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 AC006504.4-201ENST00000592118 1568 ntBASIC14.14□□□□□ -0.15
SHISA3A0PJX4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 AC104819.1-201ENST00000504587 486 ntBASIC14.14□□□□□ -0.15
SHISA3A0PJX4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 AL591684.3-201ENST00000605187 298 ntBASIC14.14□□□□□ -0.15
SHISA3A0PJX4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.14□□□□□ -0.15
SHISA3A0PJX4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms