Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC136604.1-201ENST00000418535 575 ntBASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 PHKG1P2-201ENST00000457537 863 ntBASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC000095.1-201ENST00000603208 874 ntBASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.33■□□□□ 0.85
LOC102724428A0A0B4J2F2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.33■□□□□ 0.84
LOC102724428A0A0B4J2F2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.33■□□□□ 0.84
LOC102724428A0A0B4J2F2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LOC102724428A0A0B4J2F2 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC20.33■□□□□ 0.84
LOC102724428A0A0B4J2F2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
LOC102724428A0A0B4J2F2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.33■□□□□ 0.84
LOC102724428A0A0B4J2F2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
LOC102724428A0A0B4J2F2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
LOC102724428A0A0B4J2F2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LOC102724428A0A0B4J2F2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC006033.1-201ENST00000440505 426 ntBASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 KRT8P13-201ENST00000463294 1010 ntBASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC022137.2-201ENST00000503482 481 ntBASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 FAM86HP-204ENST00000513466 959 ntBASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 HNRNPUP1-201ENST00000554987 333 ntBASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC102724428A0A0B4J2F2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 CNN2P8-201ENST00000421872 913 ntBASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LOC102724428A0A0B4J2F2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms