Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 FAM210CP-201ENST00000445714 574 ntBASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 AC005412.3-201ENST00000580309 715 ntBASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 PGM5P2-202ENST00000637225 1043 ntBASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV5A0A0B4J249 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 HCG4-201ENST00000418983 998 ntBASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 ATP5G2P1-201ENST00000433580 426 ntBASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 AL355877.3-201ENST00000622820 899 ntBASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 AL358472.4-201ENST00000633140 710 ntBASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 AL805961.1-202ENST00000641562 540 ntBASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TRAV5A0A0B4J249 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.65□□□□□ -0.39
TRAV5A0A0B4J249 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TRAV5A0A0B4J249 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TRAV5A0A0B4J249 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TRAV5A0A0B4J249 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.39
TRAV5A0A0B4J249 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
TRAV5A0A0B4J249 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.65□□□□□ -0.39
TRAV5A0A0B4J249 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TRAV5A0A0B4J249 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TRAV5A0A0B4J249 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms