Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01558Q9Y6Z2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01558Q9Y6Z2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01558Q9Y6Z2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
LINC01558Q9Y6Z2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01558Q9Y6Z2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01558Q9Y6Z2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01558Q9Y6Z2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LINC01558Q9Y6Z2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01558Q9Y6Z2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
LINC01558Q9Y6Z2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01558Q9Y6Z2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
LINC01558Q9Y6Z2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
LINC01558Q9Y6Z2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01558Q9Y6Z2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC01558Q9Y6Z2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
LINC01558Q9Y6Z2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01558Q9Y6Z2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01558Q9Y6Z2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
LINC01558Q9Y6Z2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01558Q9Y6Z2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01558Q9Y6Z2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01558Q9Y6Z2 NFE2L3P1-201ENST00000588207 1959 ntBASIC12.37□□□□□ -0.43
LINC01558Q9Y6Z2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01558Q9Y6Z2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01558Q9Y6Z2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01558Q9Y6Z2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
LINC01558Q9Y6Z2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01558Q9Y6Z2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01558Q9Y6Z2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01558Q9Y6Z2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01558Q9Y6Z2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LINC01558Q9Y6Z2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01558Q9Y6Z2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01558Q9Y6Z2 AC073130.3-201ENST00000624389 2278 ntBASIC12.35□□□□□ -0.43
LINC01558Q9Y6Z2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01558Q9Y6Z2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01558Q9Y6Z2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01558Q9Y6Z2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LINC01558Q9Y6Z2 AL137060.1-201ENST00000618151 2648 ntBASIC12.35□□□□□ -0.43
LINC01558Q9Y6Z2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01558Q9Y6Z2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC01558Q9Y6Z2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01558Q9Y6Z2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LINC01558Q9Y6Z2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01558Q9Y6Z2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC01558Q9Y6Z2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01558Q9Y6Z2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01558Q9Y6Z2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01558Q9Y6Z2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01558Q9Y6Z2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LINC01558Q9Y6Z2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01558Q9Y6Z2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01558Q9Y6Z2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC12.34□□□□□ -0.43
LINC01558Q9Y6Z2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
LINC01558Q9Y6Z2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01558Q9Y6Z2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
LINC01558Q9Y6Z2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LINC01558Q9Y6Z2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01558Q9Y6Z2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01558Q9Y6Z2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01558Q9Y6Z2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC01558Q9Y6Z2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC01558Q9Y6Z2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01558Q9Y6Z2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01558Q9Y6Z2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LINC01558Q9Y6Z2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LINC01558Q9Y6Z2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01558Q9Y6Z2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01558Q9Y6Z2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC01558Q9Y6Z2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01558Q9Y6Z2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01558Q9Y6Z2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01558Q9Y6Z2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01558Q9Y6Z2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01558Q9Y6Z2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01558Q9Y6Z2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01558Q9Y6Z2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01558Q9Y6Z2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LINC01558Q9Y6Z2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC01558Q9Y6Z2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC01558Q9Y6Z2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms