Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.57■■□□□ 1.84
PCDHA2Q9Y5H9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHA2Q9Y5H9 GUSBP5-201ENST00000418136 578 ntBASIC26.57■■□□□ 1.84
PCDHA2Q9Y5H9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHA2Q9Y5H9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHA2Q9Y5H9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
PCDHA2Q9Y5H9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
PCDHA2Q9Y5H9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHA2Q9Y5H9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHA2Q9Y5H9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHA2Q9Y5H9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHA2Q9Y5H9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.55■■□□□ 1.84
PCDHA2Q9Y5H9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHA2Q9Y5H9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
PCDHA2Q9Y5H9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
PCDHA2Q9Y5H9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.54■■□□□ 1.84
PCDHA2Q9Y5H9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHA2Q9Y5H9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHA2Q9Y5H9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHA2Q9Y5H9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHA2Q9Y5H9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHA2Q9Y5H9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.52■■□□□ 1.84
PCDHA2Q9Y5H9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.52■■□□□ 1.84
PCDHA2Q9Y5H9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
PCDHA2Q9Y5H9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHA2Q9Y5H9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHA2Q9Y5H9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.51■■□□□ 1.83
PCDHA2Q9Y5H9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.51■■□□□ 1.83
PCDHA2Q9Y5H9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.51■■□□□ 1.83
PCDHA2Q9Y5H9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.51■■□□□ 1.83
PCDHA2Q9Y5H9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHA2Q9Y5H9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.5■■□□□ 1.83
PCDHA2Q9Y5H9 Z92544.1-202ENST00000571933 1220 ntBASIC26.5■■□□□ 1.83
PCDHA2Q9Y5H9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.5■■□□□ 1.83
PCDHA2Q9Y5H9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHA2Q9Y5H9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHA2Q9Y5H9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.49■■□□□ 1.83
PCDHA2Q9Y5H9 KRT18P24-201ENST00000344739 1156 ntBASIC26.49■■□□□ 1.83
PCDHA2Q9Y5H9 AC239859.2-201ENST00000444165 318 ntBASIC26.49■■□□□ 1.83
PCDHA2Q9Y5H9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.49■■□□□ 1.83
PCDHA2Q9Y5H9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
PCDHA2Q9Y5H9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
PCDHA2Q9Y5H9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
PCDHA2Q9Y5H9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHA2Q9Y5H9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.48■■□□□ 1.83
PCDHA2Q9Y5H9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.48■■□□□ 1.83
PCDHA2Q9Y5H9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
PCDHA2Q9Y5H9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHA2Q9Y5H9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHA2Q9Y5H9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHA2Q9Y5H9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHA2Q9Y5H9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHA2Q9Y5H9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
PCDHA2Q9Y5H9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHA2Q9Y5H9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.47■■□□□ 1.83
PCDHA2Q9Y5H9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHA2Q9Y5H9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHA2Q9Y5H9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHA2Q9Y5H9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHA2Q9Y5H9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHA2Q9Y5H9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.46■■□□□ 1.83
PCDHA2Q9Y5H9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHA2Q9Y5H9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.46■■□□□ 1.83
PCDHA2Q9Y5H9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHA2Q9Y5H9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHA2Q9Y5H9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
PCDHA2Q9Y5H9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.45■■□□□ 1.82
PCDHA2Q9Y5H9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.45■■□□□ 1.82
PCDHA2Q9Y5H9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHA2Q9Y5H9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.45■■□□□ 1.82
PCDHA2Q9Y5H9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHA2Q9Y5H9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.45■■□□□ 1.82
PCDHA2Q9Y5H9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHA2Q9Y5H9 AC097639.1-201ENST00000565519 1891 ntBASIC26.45■■□□□ 1.82
PCDHA2Q9Y5H9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.44■■□□□ 1.82
PCDHA2Q9Y5H9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.44■■□□□ 1.82
PCDHA2Q9Y5H9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHA2Q9Y5H9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHA2Q9Y5H9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
PCDHA2Q9Y5H9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
PCDHA2Q9Y5H9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.43■■□□□ 1.82
PCDHA2Q9Y5H9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.43■■□□□ 1.82
PCDHA2Q9Y5H9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHA2Q9Y5H9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHA2Q9Y5H9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHA2Q9Y5H9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHA2Q9Y5H9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.42■■□□□ 1.82
PCDHA2Q9Y5H9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.42■■□□□ 1.82
PCDHA2Q9Y5H9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHA2Q9Y5H9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
PCDHA2Q9Y5H9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHA2Q9Y5H9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHA2Q9Y5H9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHA2Q9Y5H9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHA2Q9Y5H9 THA1P-201ENST00000590384 1145 ntBASIC26.41■■□□□ 1.82
PCDHA2Q9Y5H9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.41■■□□□ 1.82
PCDHA2Q9Y5H9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHA2Q9Y5H9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHA2Q9Y5H9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHA2Q9Y5H9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms