Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LINC00588Q9Y4M8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00588Q9Y4M8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LINC00588Q9Y4M8 KRT125P-201ENST00000546827 989 ntBASIC16.24■□□□□ 0.19
LINC00588Q9Y4M8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00588Q9Y4M8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00588Q9Y4M8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LINC00588Q9Y4M8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00588Q9Y4M8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00588Q9Y4M8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00588Q9Y4M8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00588Q9Y4M8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
LINC00588Q9Y4M8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00588Q9Y4M8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00588Q9Y4M8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC16.23■□□□□ 0.19
LINC00588Q9Y4M8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00588Q9Y4M8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LINC00588Q9Y4M8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00588Q9Y4M8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00588Q9Y4M8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00588Q9Y4M8 MIR4281-201ENST00000580852 62 ntBASIC16.22■□□□□ 0.19
LINC00588Q9Y4M8 AC011551.1-201ENST00000614101 683 ntBASIC16.22■□□□□ 0.19
LINC00588Q9Y4M8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00588Q9Y4M8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00588Q9Y4M8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00588Q9Y4M8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00588Q9Y4M8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00588Q9Y4M8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00588Q9Y4M8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
LINC00588Q9Y4M8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
LINC00588Q9Y4M8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00588Q9Y4M8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC00588Q9Y4M8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00588Q9Y4M8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00588Q9Y4M8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC00588Q9Y4M8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LINC00588Q9Y4M8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00588Q9Y4M8 AC137630.3-201ENST00000607245 391 ntBASIC16.21■□□□□ 0.19
LINC00588Q9Y4M8 MIR4787-201ENST00000607364 84 ntBASIC16.21■□□□□ 0.19
LINC00588Q9Y4M8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC00588Q9Y4M8 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC00588Q9Y4M8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00588Q9Y4M8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00588Q9Y4M8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LINC00588Q9Y4M8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00588Q9Y4M8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00588Q9Y4M8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00588Q9Y4M8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.2■□□□□ 0.18
LINC00588Q9Y4M8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.2■□□□□ 0.18
LINC00588Q9Y4M8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00588Q9Y4M8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.2■□□□□ 0.18
LINC00588Q9Y4M8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.2■□□□□ 0.18
LINC00588Q9Y4M8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00588Q9Y4M8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00588Q9Y4M8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00588Q9Y4M8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00588Q9Y4M8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LINC00588Q9Y4M8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
LINC00588Q9Y4M8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00588Q9Y4M8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.19■□□□□ 0.18
LINC00588Q9Y4M8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC00588Q9Y4M8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC00588Q9Y4M8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC00588Q9Y4M8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00588Q9Y4M8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC00588Q9Y4M8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00588Q9Y4M8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LINC00588Q9Y4M8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC00588Q9Y4M8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00588Q9Y4M8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC00588Q9Y4M8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00588Q9Y4M8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00588Q9Y4M8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
LINC00588Q9Y4M8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.18■□□□□ 0.18
LINC00588Q9Y4M8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.18■□□□□ 0.18
LINC00588Q9Y4M8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00588Q9Y4M8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC16.17■□□□□ 0.18
LINC00588Q9Y4M8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00588Q9Y4M8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00588Q9Y4M8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC00588Q9Y4M8 AL356441.2-201ENST00000443009 864 ntBASIC16.17■□□□□ 0.18
LINC00588Q9Y4M8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00588Q9Y4M8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LINC00588Q9Y4M8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00588Q9Y4M8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.17■□□□□ 0.18
LINC00588Q9Y4M8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00588Q9Y4M8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00588Q9Y4M8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00588Q9Y4M8 AC021242.3-201ENST00000607598 1377 ntBASIC16.16■□□□□ 0.18
LINC00588Q9Y4M8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00588Q9Y4M8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00588Q9Y4M8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LINC00588Q9Y4M8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00588Q9Y4M8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.16■□□□□ 0.18
LINC00588Q9Y4M8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00588Q9Y4M8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00588Q9Y4M8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LINC00588Q9Y4M8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00588Q9Y4M8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.15■□□□□ 0.18
LINC00588Q9Y4M8 DUSP8P4-201ENST00000399538 1761 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms