Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
LRCH1Q9Y2L9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LRCH1Q9Y2L9 AC233723.2-201ENST00000623798 2106 ntBASIC22.36■■□□□ 1.17
LRCH1Q9Y2L9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LRCH1Q9Y2L9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.36■■□□□ 1.17
LRCH1Q9Y2L9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRCH1Q9Y2L9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
LRCH1Q9Y2L9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.35■■□□□ 1.17
LRCH1Q9Y2L9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRCH1Q9Y2L9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
LRCH1Q9Y2L9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LRCH1Q9Y2L9 C1orf229-201ENST00000623686 2258 ntBASIC22.34■■□□□ 1.17
LRCH1Q9Y2L9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRCH1Q9Y2L9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRCH1Q9Y2L9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRCH1Q9Y2L9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRCH1Q9Y2L9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRCH1Q9Y2L9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRCH1Q9Y2L9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LRCH1Q9Y2L9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRCH1Q9Y2L9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.33■■□□□ 1.17
LRCH1Q9Y2L9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRCH1Q9Y2L9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
LRCH1Q9Y2L9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.33■■□□□ 1.16
LRCH1Q9Y2L9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
LRCH1Q9Y2L9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
LRCH1Q9Y2L9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
LRCH1Q9Y2L9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
LRCH1Q9Y2L9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.33■■□□□ 1.16
LRCH1Q9Y2L9 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRCH1Q9Y2L9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
LRCH1Q9Y2L9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.32■■□□□ 1.16
LRCH1Q9Y2L9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRCH1Q9Y2L9 AC087741.3-201ENST00000624270 1347 ntBASIC22.31■■□□□ 1.16
LRCH1Q9Y2L9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.31■■□□□ 1.16
LRCH1Q9Y2L9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.31■■□□□ 1.16
LRCH1Q9Y2L9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.31■■□□□ 1.16
LRCH1Q9Y2L9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.31■■□□□ 1.16
LRCH1Q9Y2L9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRCH1Q9Y2L9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRCH1Q9Y2L9 AC004812.2-201ENST00000611079 2094 ntBASIC22.3■■□□□ 1.16
LRCH1Q9Y2L9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.3■■□□□ 1.16
LRCH1Q9Y2L9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
LRCH1Q9Y2L9 AC044849.2-201ENST00000606596 710 ntBASIC22.3■■□□□ 1.16
LRCH1Q9Y2L9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRCH1Q9Y2L9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.3■■□□□ 1.16
LRCH1Q9Y2L9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRCH1Q9Y2L9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.29■■□□□ 1.16
LRCH1Q9Y2L9 AC137767.1-201ENST00000602918 1920 ntBASIC22.29■■□□□ 1.16
LRCH1Q9Y2L9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRCH1Q9Y2L9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRCH1Q9Y2L9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRCH1Q9Y2L9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.29■■□□□ 1.16
LRCH1Q9Y2L9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
LRCH1Q9Y2L9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRCH1Q9Y2L9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRCH1Q9Y2L9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.29■■□□□ 1.16
LRCH1Q9Y2L9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRCH1Q9Y2L9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRCH1Q9Y2L9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
LRCH1Q9Y2L9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRCH1Q9Y2L9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRCH1Q9Y2L9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.28■■□□□ 1.16
LRCH1Q9Y2L9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.28■■□□□ 1.16
LRCH1Q9Y2L9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
LRCH1Q9Y2L9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.28■■□□□ 1.16
LRCH1Q9Y2L9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRCH1Q9Y2L9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRCH1Q9Y2L9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.27■■□□□ 1.16
LRCH1Q9Y2L9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.27■■□□□ 1.16
LRCH1Q9Y2L9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
LRCH1Q9Y2L9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LRCH1Q9Y2L9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
LRCH1Q9Y2L9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRCH1Q9Y2L9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LRCH1Q9Y2L9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRCH1Q9Y2L9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRCH1Q9Y2L9 SLC25A24-204ENST00000569674 2357 ntBASIC22.26■■□□□ 1.15
LRCH1Q9Y2L9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRCH1Q9Y2L9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRCH1Q9Y2L9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.26■■□□□ 1.15
LRCH1Q9Y2L9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRCH1Q9Y2L9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.25■■□□□ 1.15
LRCH1Q9Y2L9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
LRCH1Q9Y2L9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRCH1Q9Y2L9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRCH1Q9Y2L9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.24■■□□□ 1.15
LRCH1Q9Y2L9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
LRCH1Q9Y2L9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LRCH1Q9Y2L9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRCH1Q9Y2L9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRCH1Q9Y2L9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.24■■□□□ 1.15
LRCH1Q9Y2L9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRCH1Q9Y2L9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRCH1Q9Y2L9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.23■■□□□ 1.15
LRCH1Q9Y2L9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LRCH1Q9Y2L9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRCH1Q9Y2L9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRCH1Q9Y2L9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.23■■□□□ 1.15
LRCH1Q9Y2L9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms