Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZSWIM3Q96MP5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
ZSWIM3Q96MP5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZSWIM3Q96MP5 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZSWIM3Q96MP5 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZSWIM3Q96MP5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.62■■□□□ 1.53
ZSWIM3Q96MP5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.62■■□□□ 1.53
ZSWIM3Q96MP5 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.62■■□□□ 1.53
ZSWIM3Q96MP5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZSWIM3Q96MP5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZSWIM3Q96MP5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.62■■□□□ 1.53
ZSWIM3Q96MP5 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZSWIM3Q96MP5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZSWIM3Q96MP5 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZSWIM3Q96MP5 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.61■■□□□ 1.53
ZSWIM3Q96MP5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ZSWIM3Q96MP5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.61■■□□□ 1.53
ZSWIM3Q96MP5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.61■■□□□ 1.53
ZSWIM3Q96MP5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.61■■□□□ 1.53
ZSWIM3Q96MP5 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ZSWIM3Q96MP5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ZSWIM3Q96MP5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.6■■□□□ 1.53
ZSWIM3Q96MP5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.6■■□□□ 1.53
ZSWIM3Q96MP5 AL117332.1-201ENST00000622628 974 ntBASIC24.6■■□□□ 1.53
ZSWIM3Q96MP5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZSWIM3Q96MP5 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZSWIM3Q96MP5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZSWIM3Q96MP5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
ZSWIM3Q96MP5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.59■■□□□ 1.53
ZSWIM3Q96MP5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
ZSWIM3Q96MP5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.59■■□□□ 1.53
ZSWIM3Q96MP5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.59■■□□□ 1.53
ZSWIM3Q96MP5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.59■■□□□ 1.53
ZSWIM3Q96MP5 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZSWIM3Q96MP5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
ZSWIM3Q96MP5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
ZSWIM3Q96MP5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
ZSWIM3Q96MP5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.58■■□□□ 1.53
ZSWIM3Q96MP5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.58■■□□□ 1.53
ZSWIM3Q96MP5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.58■■□□□ 1.53
ZSWIM3Q96MP5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
ZSWIM3Q96MP5 MIR638-201ENST00000385237 100 ntBASIC24.57■■□□□ 1.52
ZSWIM3Q96MP5 MTDHP2-201ENST00000601468 714 ntBASIC24.57■■□□□ 1.52
ZSWIM3Q96MP5 AF131216.4-201ENST00000638924 1588 ntBASIC24.57■■□□□ 1.52
ZSWIM3Q96MP5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.57■■□□□ 1.52
ZSWIM3Q96MP5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
ZSWIM3Q96MP5 FOXO3B-201ENST00000395675 1928 ntBASIC24.57■■□□□ 1.52
ZSWIM3Q96MP5 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
ZSWIM3Q96MP5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.56■■□□□ 1.52
ZSWIM3Q96MP5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
ZSWIM3Q96MP5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
ZSWIM3Q96MP5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.56■■□□□ 1.52
ZSWIM3Q96MP5 MIR3621-201ENST00000580529 85 ntBASIC24.56■■□□□ 1.52
ZSWIM3Q96MP5 MIR6724-1-201ENST00000616420 92 ntBASIC24.56■■□□□ 1.52
ZSWIM3Q96MP5 MIR6724-2-201ENST00000616483 92 ntBASIC24.56■■□□□ 1.52
ZSWIM3Q96MP5 MIR6724-4-201ENST00000617390 92 ntBASIC24.56■■□□□ 1.52
ZSWIM3Q96MP5 MIR6724-3-201ENST00000622482 92 ntBASIC24.56■■□□□ 1.52
ZSWIM3Q96MP5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ZSWIM3Q96MP5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ZSWIM3Q96MP5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ZSWIM3Q96MP5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ZSWIM3Q96MP5 AL136116.3-201ENST00000402907 1138 ntBASIC24.55■■□□□ 1.52
ZSWIM3Q96MP5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ZSWIM3Q96MP5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ZSWIM3Q96MP5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.55■■□□□ 1.52
ZSWIM3Q96MP5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.55■■□□□ 1.52
ZSWIM3Q96MP5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.55■■□□□ 1.52
ZSWIM3Q96MP5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.55■■□□□ 1.52
ZSWIM3Q96MP5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
ZSWIM3Q96MP5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ZSWIM3Q96MP5 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ZSWIM3Q96MP5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ZSWIM3Q96MP5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ZSWIM3Q96MP5 MIR935-201ENST00000401179 91 ntBASIC24.54■■□□□ 1.52
ZSWIM3Q96MP5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.54■■□□□ 1.52
ZSWIM3Q96MP5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ZSWIM3Q96MP5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.53■■□□□ 1.52
ZSWIM3Q96MP5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ZSWIM3Q96MP5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
ZSWIM3Q96MP5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.53■■□□□ 1.52
ZSWIM3Q96MP5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.53■■□□□ 1.52
ZSWIM3Q96MP5 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.53■■□□□ 1.52
ZSWIM3Q96MP5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.53■■□□□ 1.52
ZSWIM3Q96MP5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
ZSWIM3Q96MP5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
ZSWIM3Q96MP5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
ZSWIM3Q96MP5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.52■■□□□ 1.52
ZSWIM3Q96MP5 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
ZSWIM3Q96MP5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
ZSWIM3Q96MP5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.51■■□□□ 1.51
ZSWIM3Q96MP5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.51■■□□□ 1.51
ZSWIM3Q96MP5 MIR4466-201ENST00000606121 54 ntBASIC24.51■■□□□ 1.51
ZSWIM3Q96MP5 AL139246.5-201ENST00000606645 996 ntBASIC24.51■■□□□ 1.51
ZSWIM3Q96MP5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.51■■□□□ 1.51
ZSWIM3Q96MP5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ZSWIM3Q96MP5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZSWIM3Q96MP5 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZSWIM3Q96MP5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZSWIM3Q96MP5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZSWIM3Q96MP5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms