Protein–RNA interactions for Protein: Q92546

RGP1, RAB6A-GEF complex partner protein 2, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1Q92546 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RGP1Q92546 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RGP1Q92546 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RGP1Q92546 AC068473.5-201ENST00000616428 2072 ntBASIC20.63■□□□□ 0.89
RGP1Q92546 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RGP1Q92546 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RGP1Q92546 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RGP1Q92546 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.62■□□□□ 0.89
RGP1Q92546 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.62■□□□□ 0.89
RGP1Q92546 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RGP1Q92546 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RGP1Q92546 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RGP1Q92546 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RGP1Q92546 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.61■□□□□ 0.89
RGP1Q92546 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RGP1Q92546 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RGP1Q92546 MIR6089-201ENST00000616698 64 ntBASIC20.61■□□□□ 0.89
RGP1Q92546 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RGP1Q92546 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RGP1Q92546 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.61■□□□□ 0.89
RGP1Q92546 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RGP1Q92546 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RGP1Q92546 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RGP1Q92546 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RGP1Q92546 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RGP1Q92546 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
RGP1Q92546 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.6■□□□□ 0.89
RGP1Q92546 AC025884.2-201ENST00000553429 711 ntBASIC20.6■□□□□ 0.89
RGP1Q92546 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.6■□□□□ 0.89
RGP1Q92546 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.6■□□□□ 0.89
RGP1Q92546 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
RGP1Q92546 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RGP1Q92546 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
RGP1Q92546 AC012676.1-201ENST00000574705 1949 ntBASIC20.6■□□□□ 0.89
RGP1Q92546 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RGP1Q92546 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.6■□□□□ 0.89
RGP1Q92546 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RGP1Q92546 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.59■□□□□ 0.89
RGP1Q92546 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.59■□□□□ 0.89
RGP1Q92546 MIR3648-2-201ENST00000581792 180 ntBASIC20.59■□□□□ 0.89
RGP1Q92546 MIR3648-1-201ENST00000615959 180 ntBASIC20.59■□□□□ 0.89
RGP1Q92546 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.59■□□□□ 0.89
RGP1Q92546 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.59■□□□□ 0.89
RGP1Q92546 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RGP1Q92546 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.59■□□□□ 0.89
RGP1Q92546 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RGP1Q92546 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.59■□□□□ 0.89
RGP1Q92546 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RGP1Q92546 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RGP1Q92546 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RGP1Q92546 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.58■□□□□ 0.89
RGP1Q92546 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RGP1Q92546 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.58■□□□□ 0.89
RGP1Q92546 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.58■□□□□ 0.89
RGP1Q92546 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RGP1Q92546 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
RGP1Q92546 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.58■□□□□ 0.88
RGP1Q92546 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RGP1Q92546 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
RGP1Q92546 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RGP1Q92546 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RGP1Q92546 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.57■□□□□ 0.88
RGP1Q92546 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RGP1Q92546 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RGP1Q92546 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RGP1Q92546 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.56■□□□□ 0.88
RGP1Q92546 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.56■□□□□ 0.88
RGP1Q92546 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RGP1Q92546 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.56■□□□□ 0.88
RGP1Q92546 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RGP1Q92546 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.56■□□□□ 0.88
RGP1Q92546 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.56■□□□□ 0.88
RGP1Q92546 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RGP1Q92546 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RGP1Q92546 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.56■□□□□ 0.88
RGP1Q92546 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RGP1Q92546 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RGP1Q92546 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RGP1Q92546 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RGP1Q92546 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.55■□□□□ 0.88
RGP1Q92546 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RGP1Q92546 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RGP1Q92546 ABCB10P4-201ENST00000566803 2184 ntBASIC20.55■□□□□ 0.88
RGP1Q92546 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RGP1Q92546 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.54■□□□□ 0.88
RGP1Q92546 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGP1Q92546 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RGP1Q92546 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.54■□□□□ 0.88
RGP1Q92546 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RGP1Q92546 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RGP1Q92546 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGP1Q92546 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGP1Q92546 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGP1Q92546 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RGP1Q92546 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RGP1Q92546 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RGP1Q92546 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.53■□□□□ 0.88
RGP1Q92546 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.53■□□□□ 0.88
RGP1Q92546 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RGP1Q92546 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms