Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC28.31■■■□□ 2.12
SH3RF3Q8TEJ3 UNC93B8-201ENST00000511903 705 ntBASIC28.31■■■□□ 2.12
SH3RF3Q8TEJ3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SH3RF3Q8TEJ3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SH3RF3Q8TEJ3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SH3RF3Q8TEJ3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.31■■■□□ 2.12
SH3RF3Q8TEJ3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SH3RF3Q8TEJ3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SH3RF3Q8TEJ3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SH3RF3Q8TEJ3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SH3RF3Q8TEJ3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
SH3RF3Q8TEJ3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28.3■■■□□ 2.12
SH3RF3Q8TEJ3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SH3RF3Q8TEJ3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.29■■■□□ 2.12
SH3RF3Q8TEJ3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SH3RF3Q8TEJ3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
SH3RF3Q8TEJ3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC28.29■■■□□ 2.12
SH3RF3Q8TEJ3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
SH3RF3Q8TEJ3 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.29■■■□□ 2.12
SH3RF3Q8TEJ3 AC092803.2-201ENST00000564287 1899 ntBASIC28.29■■■□□ 2.12
SH3RF3Q8TEJ3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SH3RF3Q8TEJ3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SH3RF3Q8TEJ3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SH3RF3Q8TEJ3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC28.28■■■□□ 2.12
SH3RF3Q8TEJ3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SH3RF3Q8TEJ3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC28.28■■■□□ 2.12
SH3RF3Q8TEJ3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC28.28■■■□□ 2.12
SH3RF3Q8TEJ3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC28.28■■■□□ 2.12
SH3RF3Q8TEJ3 GRAMD4P7-201ENST00000578182 1232 ntBASIC28.28■■■□□ 2.12
SH3RF3Q8TEJ3 AC011551.1-201ENST00000614101 683 ntBASIC28.28■■■□□ 2.12
SH3RF3Q8TEJ3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC28.28■■■□□ 2.12
SH3RF3Q8TEJ3 AC097639.1-201ENST00000565519 1891 ntBASIC28.27■■■□□ 2.12
SH3RF3Q8TEJ3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
SH3RF3Q8TEJ3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.27■■■□□ 2.12
SH3RF3Q8TEJ3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SH3RF3Q8TEJ3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SH3RF3Q8TEJ3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SH3RF3Q8TEJ3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
SH3RF3Q8TEJ3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
SH3RF3Q8TEJ3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SH3RF3Q8TEJ3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SH3RF3Q8TEJ3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
SH3RF3Q8TEJ3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC28.26■■■□□ 2.11
SH3RF3Q8TEJ3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SH3RF3Q8TEJ3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC28.25■■■□□ 2.11
SH3RF3Q8TEJ3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
SH3RF3Q8TEJ3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC28.25■■■□□ 2.11
SH3RF3Q8TEJ3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
SH3RF3Q8TEJ3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SH3RF3Q8TEJ3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC28.24■■■□□ 2.11
SH3RF3Q8TEJ3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.24■■■□□ 2.11
SH3RF3Q8TEJ3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC28.24■■■□□ 2.11
SH3RF3Q8TEJ3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SH3RF3Q8TEJ3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC28.23■■■□□ 2.11
SH3RF3Q8TEJ3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SH3RF3Q8TEJ3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC28.23■■■□□ 2.11
SH3RF3Q8TEJ3 TSPY9P-201ENST00000440215 945 ntBASIC28.23■■■□□ 2.11
SH3RF3Q8TEJ3 TSPY11P-201ENST00000442607 1045 ntBASIC28.23■■■□□ 2.11
SH3RF3Q8TEJ3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC28.23■■■□□ 2.11
SH3RF3Q8TEJ3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC28.23■■■□□ 2.11
SH3RF3Q8TEJ3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SH3RF3Q8TEJ3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SH3RF3Q8TEJ3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
SH3RF3Q8TEJ3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SH3RF3Q8TEJ3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SH3RF3Q8TEJ3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SH3RF3Q8TEJ3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
SH3RF3Q8TEJ3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC28.22■■■□□ 2.11
SH3RF3Q8TEJ3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SH3RF3Q8TEJ3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.22■■■□□ 2.11
SH3RF3Q8TEJ3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
SH3RF3Q8TEJ3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.22■■■□□ 2.11
SH3RF3Q8TEJ3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SH3RF3Q8TEJ3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
SH3RF3Q8TEJ3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.22■■■□□ 2.11
SH3RF3Q8TEJ3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SH3RF3Q8TEJ3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SH3RF3Q8TEJ3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SH3RF3Q8TEJ3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC28.21■■■□□ 2.11
SH3RF3Q8TEJ3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC28.21■■■□□ 2.11
SH3RF3Q8TEJ3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC28.21■■■□□ 2.11
SH3RF3Q8TEJ3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC28.21■■■□□ 2.11
SH3RF3Q8TEJ3 AC092028.1-203ENST00000608262 953 ntBASIC28.21■■■□□ 2.11
SH3RF3Q8TEJ3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SH3RF3Q8TEJ3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SH3RF3Q8TEJ3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC28.2■■■□□ 2.11
SH3RF3Q8TEJ3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.2■■■□□ 2.11
SH3RF3Q8TEJ3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SH3RF3Q8TEJ3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SH3RF3Q8TEJ3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC28.19■■■□□ 2.1
SH3RF3Q8TEJ3 KRT16P3-201ENST00000439127 1283 ntBASIC28.19■■■□□ 2.1
SH3RF3Q8TEJ3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC28.19■■■□□ 2.1
SH3RF3Q8TEJ3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.18■■■□□ 2.1
SH3RF3Q8TEJ3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
SH3RF3Q8TEJ3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
SH3RF3Q8TEJ3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SH3RF3Q8TEJ3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.18■■■□□ 2.1
SH3RF3Q8TEJ3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.18■■■□□ 2.1
SH3RF3Q8TEJ3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.18■■■□□ 2.1
SH3RF3Q8TEJ3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms