Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC29.59■■■□□ 2.33
DDX60Q8IY21 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.59■■■□□ 2.33
DDX60Q8IY21 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
DDX60Q8IY21 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
DDX60Q8IY21 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
DDX60Q8IY21 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
DDX60Q8IY21 AF131216.4-201ENST00000638924 1588 ntBASIC29.59■■■□□ 2.33
DDX60Q8IY21 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
DDX60Q8IY21 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC29.59■■■□□ 2.33
DDX60Q8IY21 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC29.58■■■□□ 2.33
DDX60Q8IY21 GAK-223ENST00000628912 497 ntTSL 5 BASIC29.57■■■□□ 2.32
DDX60Q8IY21 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
DDX60Q8IY21 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC29.57■■■□□ 2.32
DDX60Q8IY21 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
DDX60Q8IY21 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
DDX60Q8IY21 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
DDX60Q8IY21 AL117332.1-201ENST00000622628 974 ntBASIC29.57■■■□□ 2.32
DDX60Q8IY21 PKM-203ENST00000389093 2279 ntTSL 5 BASIC29.56■■■□□ 2.32
DDX60Q8IY21 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
DDX60Q8IY21 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
DDX60Q8IY21 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
DDX60Q8IY21 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC29.56■■■□□ 2.32
DDX60Q8IY21 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC29.56■■■□□ 2.32
DDX60Q8IY21 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC29.56■■■□□ 2.32
DDX60Q8IY21 TRIR-202ENST00000588213 841 ntTSL 3 BASIC29.56■■■□□ 2.32
DDX60Q8IY21 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC29.56■■■□□ 2.32
DDX60Q8IY21 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
DDX60Q8IY21 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
DDX60Q8IY21 ERN1-208ENST00000606895 2068 ntBASIC29.55■■■□□ 2.32
DDX60Q8IY21 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
DDX60Q8IY21 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
DDX60Q8IY21 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.55■■■□□ 2.32
DDX60Q8IY21 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
DDX60Q8IY21 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.54■■■□□ 2.32
DDX60Q8IY21 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
DDX60Q8IY21 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
DDX60Q8IY21 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
DDX60Q8IY21 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
DDX60Q8IY21 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
DDX60Q8IY21 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
DDX60Q8IY21 AC008406.3-201ENST00000620001 1374 ntBASIC29.53■■■□□ 2.32
DDX60Q8IY21 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
DDX60Q8IY21 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
DDX60Q8IY21 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC29.52■■■□□ 2.32
DDX60Q8IY21 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
DDX60Q8IY21 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.32
DDX60Q8IY21 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
DDX60Q8IY21 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
DDX60Q8IY21 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
DDX60Q8IY21 FOXO3B-201ENST00000395675 1928 ntBASIC29.5■■■□□ 2.31
DDX60Q8IY21 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC29.5■■■□□ 2.31
DDX60Q8IY21 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
DDX60Q8IY21 QDPR-206ENST00000508623 601 ntTSL 3 BASIC29.5■■■□□ 2.31
DDX60Q8IY21 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC29.5■■■□□ 2.31
DDX60Q8IY21 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC29.5■■■□□ 2.31
DDX60Q8IY21 MTDHP2-201ENST00000601468 714 ntBASIC29.5■■■□□ 2.31
DDX60Q8IY21 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC29.5■■■□□ 2.31
DDX60Q8IY21 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
DDX60Q8IY21 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC29.49■■■□□ 2.31
DDX60Q8IY21 AL121749.1-202ENST00000609313 2153 ntBASIC29.48■■■□□ 2.31
DDX60Q8IY21 MIR6724-1-201ENST00000616420 92 ntBASIC29.48■■■□□ 2.31
DDX60Q8IY21 MIR6724-2-201ENST00000616483 92 ntBASIC29.48■■■□□ 2.31
DDX60Q8IY21 MIR6724-4-201ENST00000617390 92 ntBASIC29.48■■■□□ 2.31
DDX60Q8IY21 MIR6724-3-201ENST00000622482 92 ntBASIC29.48■■■□□ 2.31
DDX60Q8IY21 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
DDX60Q8IY21 SRR-208ENST00000576848 588 ntTSL 4 BASIC29.48■■■□□ 2.31
DDX60Q8IY21 AL512631.2-201ENST00000604634 923 ntBASIC29.48■■■□□ 2.31
DDX60Q8IY21 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
DDX60Q8IY21 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC29.47■■■□□ 2.31
DDX60Q8IY21 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
DDX60Q8IY21 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
DDX60Q8IY21 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.46■■■□□ 2.31
DDX60Q8IY21 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC29.46■■■□□ 2.31
DDX60Q8IY21 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
DDX60Q8IY21 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC29.46■■■□□ 2.31
DDX60Q8IY21 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
DDX60Q8IY21 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
DDX60Q8IY21 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC29.46■■■□□ 2.31
DDX60Q8IY21 SNX5-217ENST00000606557 1087 ntBASIC29.46■■■□□ 2.31
DDX60Q8IY21 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC29.46■■■□□ 2.31
DDX60Q8IY21 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
DDX60Q8IY21 LSM4-201ENST00000252816 986 ntTSL 2 BASIC29.45■■■□□ 2.31
DDX60Q8IY21 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
DDX60Q8IY21 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC29.45■■■□□ 2.31
DDX60Q8IY21 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC29.45■■■□□ 2.31
DDX60Q8IY21 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.3
DDX60Q8IY21 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
DDX60Q8IY21 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC29.45■■■□□ 2.3
DDX60Q8IY21 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
DDX60Q8IY21 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC29.44■■■□□ 2.3
DDX60Q8IY21 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC29.44■■■□□ 2.3
DDX60Q8IY21 PEMT-206ENST00000435340 960 ntTSL 5 BASIC29.44■■■□□ 2.3
DDX60Q8IY21 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC29.44■■■□□ 2.3
DDX60Q8IY21 SSSCA1-AS1-201ENST00000567594 614 ntBASIC29.44■■■□□ 2.3
DDX60Q8IY21 AC010997.5-201ENST00000609182 354 ntBASIC29.44■■■□□ 2.3
DDX60Q8IY21 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
DDX60Q8IY21 EXOG-217ENST00000630638 197 ntTSL 5 BASIC29.44■■■□□ 2.3
DDX60Q8IY21 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
DDX60Q8IY21 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
DDX60Q8IY21 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms