Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.33■■□□□ 1
CROCCP3Q8IVE0 LINC00273-201ENST00000539813 1452 ntBASIC21.32■■□□□ 1
CROCCP3Q8IVE0 AC141586.4-201ENST00000624558 1573 ntBASIC21.32■■□□□ 1
CROCCP3Q8IVE0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.32■■□□□ 1
CROCCP3Q8IVE0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CROCCP3Q8IVE0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.32■■□□□ 1
CROCCP3Q8IVE0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.32■■□□□ 1
CROCCP3Q8IVE0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CROCCP3Q8IVE0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CROCCP3Q8IVE0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CROCCP3Q8IVE0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CROCCP3Q8IVE0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.32■■□□□ 1
CROCCP3Q8IVE0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CROCCP3Q8IVE0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CROCCP3Q8IVE0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.32■■□□□ 1
CROCCP3Q8IVE0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CROCCP3Q8IVE0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CROCCP3Q8IVE0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CROCCP3Q8IVE0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.31■■□□□ 1
CROCCP3Q8IVE0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CROCCP3Q8IVE0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CROCCP3Q8IVE0 AC233723.2-201ENST00000623798 2106 ntBASIC21.31■■□□□ 1
CROCCP3Q8IVE0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CROCCP3Q8IVE0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CROCCP3Q8IVE0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.3■■□□□ 1
CROCCP3Q8IVE0 PKD1P6-201ENST00000343738 4769 ntBASIC21.3■■□□□ 1
CROCCP3Q8IVE0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CROCCP3Q8IVE0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CROCCP3Q8IVE0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.3■■□□□ 1
CROCCP3Q8IVE0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CROCCP3Q8IVE0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.3■■□□□ 1
CROCCP3Q8IVE0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CROCCP3Q8IVE0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CROCCP3Q8IVE0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.29■■□□□ 1
CROCCP3Q8IVE0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.29■■□□□ 1
CROCCP3Q8IVE0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CROCCP3Q8IVE0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CROCCP3Q8IVE0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
CROCCP3Q8IVE0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CROCCP3Q8IVE0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CROCCP3Q8IVE0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.29■■□□□ 1
CROCCP3Q8IVE0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.29■■□□□ 1
CROCCP3Q8IVE0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CROCCP3Q8IVE0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.29■■□□□ 1
CROCCP3Q8IVE0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CROCCP3Q8IVE0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.28■■□□□ 1
CROCCP3Q8IVE0 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.28■■□□□ 1
CROCCP3Q8IVE0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CROCCP3Q8IVE0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CROCCP3Q8IVE0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.28■■□□□ 1
CROCCP3Q8IVE0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.28■■□□□ 1
CROCCP3Q8IVE0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CROCCP3Q8IVE0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.28■■□□□ 1
CROCCP3Q8IVE0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CROCCP3Q8IVE0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CROCCP3Q8IVE0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.27■■□□□ 1
CROCCP3Q8IVE0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
CROCCP3Q8IVE0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.27■■□□□ 1
CROCCP3Q8IVE0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CROCCP3Q8IVE0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.27■■□□□ 1
CROCCP3Q8IVE0 AC127496.7-201ENST00000625110 1798 ntBASIC21.27■■□□□ 1
CROCCP3Q8IVE0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CROCCP3Q8IVE0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CROCCP3Q8IVE0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CROCCP3Q8IVE0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CROCCP3Q8IVE0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CROCCP3Q8IVE0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CROCCP3Q8IVE0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CROCCP3Q8IVE0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.26■□□□□ 0.99
CROCCP3Q8IVE0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CROCCP3Q8IVE0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CROCCP3Q8IVE0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CROCCP3Q8IVE0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP3Q8IVE0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CROCCP3Q8IVE0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP3Q8IVE0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CROCCP3Q8IVE0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP3Q8IVE0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.25■□□□□ 0.99
CROCCP3Q8IVE0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CROCCP3Q8IVE0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.25■□□□□ 0.99
CROCCP3Q8IVE0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CROCCP3Q8IVE0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CROCCP3Q8IVE0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CROCCP3Q8IVE0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CROCCP3Q8IVE0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CROCCP3Q8IVE0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CROCCP3Q8IVE0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CROCCP3Q8IVE0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CROCCP3Q8IVE0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.23■□□□□ 0.99
CROCCP3Q8IVE0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
CROCCP3Q8IVE0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CROCCP3Q8IVE0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CROCCP3Q8IVE0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CROCCP3Q8IVE0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.23■□□□□ 0.99
CROCCP3Q8IVE0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
CROCCP3Q8IVE0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CROCCP3Q8IVE0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.22■□□□□ 0.99
CROCCP3Q8IVE0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CROCCP3Q8IVE0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CROCCP3Q8IVE0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms