Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD2Q8IV50 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD2Q8IV50 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
LYSMD2Q8IV50 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.74■□□□□ 0.91
LYSMD2Q8IV50 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD2Q8IV50 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD2Q8IV50 AC108673.1-201ENST00000510422 1159 ntBASIC20.74■□□□□ 0.91
LYSMD2Q8IV50 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD2Q8IV50 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD2Q8IV50 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD2Q8IV50 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD2Q8IV50 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD2Q8IV50 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LYSMD2Q8IV50 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.73■□□□□ 0.91
LYSMD2Q8IV50 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.72■□□□□ 0.91
LYSMD2Q8IV50 MIR6090-201ENST00000622481 60 ntBASIC20.72■□□□□ 0.91
LYSMD2Q8IV50 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.72■□□□□ 0.91
LYSMD2Q8IV50 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD2Q8IV50 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.72■□□□□ 0.91
LYSMD2Q8IV50 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.72■□□□□ 0.91
LYSMD2Q8IV50 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD2Q8IV50 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD2Q8IV50 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LYSMD2Q8IV50 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.71■□□□□ 0.91
LYSMD2Q8IV50 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.71■□□□□ 0.91
LYSMD2Q8IV50 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD2Q8IV50 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD2Q8IV50 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.69■□□□□ 0.9
LYSMD2Q8IV50 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LYSMD2Q8IV50 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD2Q8IV50 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.69■□□□□ 0.9
LYSMD2Q8IV50 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LYSMD2Q8IV50 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
LYSMD2Q8IV50 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.69■□□□□ 0.9
LYSMD2Q8IV50 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD2Q8IV50 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD2Q8IV50 SLC25A24-204ENST00000569674 2357 ntBASIC20.68■□□□□ 0.9
LYSMD2Q8IV50 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD2Q8IV50 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD2Q8IV50 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
LYSMD2Q8IV50 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD2Q8IV50 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD2Q8IV50 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.67■□□□□ 0.9
LYSMD2Q8IV50 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD2Q8IV50 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD2Q8IV50 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.67■□□□□ 0.9
LYSMD2Q8IV50 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD2Q8IV50 AC005559.1-201ENST00000589661 871 ntBASIC20.67■□□□□ 0.9
LYSMD2Q8IV50 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD2Q8IV50 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD2Q8IV50 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD2Q8IV50 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.66■□□□□ 0.9
LYSMD2Q8IV50 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD2Q8IV50 AC137767.1-201ENST00000602918 1920 ntBASIC20.66■□□□□ 0.9
LYSMD2Q8IV50 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD2Q8IV50 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD2Q8IV50 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LYSMD2Q8IV50 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
LYSMD2Q8IV50 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.65■□□□□ 0.9
LYSMD2Q8IV50 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.64■□□□□ 0.9
LYSMD2Q8IV50 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
LYSMD2Q8IV50 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
LYSMD2Q8IV50 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.64■□□□□ 0.9
LYSMD2Q8IV50 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LYSMD2Q8IV50 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LYSMD2Q8IV50 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
LYSMD2Q8IV50 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.64■□□□□ 0.89
LYSMD2Q8IV50 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LYSMD2Q8IV50 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LYSMD2Q8IV50 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.64■□□□□ 0.89
LYSMD2Q8IV50 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LYSMD2Q8IV50 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LYSMD2Q8IV50 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LYSMD2Q8IV50 AC007375.3-201ENST00000600936 2314 ntBASIC20.64■□□□□ 0.89
LYSMD2Q8IV50 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD2Q8IV50 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.63■□□□□ 0.89
LYSMD2Q8IV50 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD2Q8IV50 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.63■□□□□ 0.89
LYSMD2Q8IV50 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LYSMD2Q8IV50 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.63■□□□□ 0.89
LYSMD2Q8IV50 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD2Q8IV50 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.62■□□□□ 0.89
LYSMD2Q8IV50 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD2Q8IV50 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD2Q8IV50 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD2Q8IV50 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD2Q8IV50 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD2Q8IV50 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD2Q8IV50 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD2Q8IV50 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.61■□□□□ 0.89
LYSMD2Q8IV50 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
LYSMD2Q8IV50 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.61■□□□□ 0.89
LYSMD2Q8IV50 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.61■□□□□ 0.89
LYSMD2Q8IV50 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.61■□□□□ 0.89
LYSMD2Q8IV50 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD2Q8IV50 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD2Q8IV50 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD2Q8IV50 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD2Q8IV50 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.6■□□□□ 0.89
LYSMD2Q8IV50 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms