Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC29.69■■■□□ 2.34
UBE3BQ7Z3V4 MIR4281-201ENST00000580852 62 ntBASIC29.69■■■□□ 2.34
UBE3BQ7Z3V4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
UBE3BQ7Z3V4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC29.69■■■□□ 2.34
UBE3BQ7Z3V4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
UBE3BQ7Z3V4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.69■■■□□ 2.34
UBE3BQ7Z3V4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC29.68■■■□□ 2.34
UBE3BQ7Z3V4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
UBE3BQ7Z3V4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
UBE3BQ7Z3V4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC29.68■■■□□ 2.34
UBE3BQ7Z3V4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC29.68■■■□□ 2.34
UBE3BQ7Z3V4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC29.68■■■□□ 2.34
UBE3BQ7Z3V4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
UBE3BQ7Z3V4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
UBE3BQ7Z3V4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC29.67■■■□□ 2.34
UBE3BQ7Z3V4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC29.67■■■□□ 2.34
UBE3BQ7Z3V4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
UBE3BQ7Z3V4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
UBE3BQ7Z3V4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
UBE3BQ7Z3V4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
UBE3BQ7Z3V4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
UBE3BQ7Z3V4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
UBE3BQ7Z3V4 AC137630.3-201ENST00000607245 391 ntBASIC29.66■■■□□ 2.34
UBE3BQ7Z3V4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC29.66■■■□□ 2.34
UBE3BQ7Z3V4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
UBE3BQ7Z3V4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
UBE3BQ7Z3V4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.65■■■□□ 2.34
UBE3BQ7Z3V4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
UBE3BQ7Z3V4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC29.65■■■□□ 2.34
UBE3BQ7Z3V4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC29.65■■■□□ 2.34
UBE3BQ7Z3V4 KRT125P-201ENST00000546827 989 ntBASIC29.65■■■□□ 2.34
UBE3BQ7Z3V4 MIR4787-201ENST00000607364 84 ntBASIC29.65■■■□□ 2.34
UBE3BQ7Z3V4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
UBE3BQ7Z3V4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC29.64■■■□□ 2.34
UBE3BQ7Z3V4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
UBE3BQ7Z3V4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
UBE3BQ7Z3V4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
UBE3BQ7Z3V4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC29.63■■■□□ 2.33
UBE3BQ7Z3V4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
UBE3BQ7Z3V4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC29.63■■■□□ 2.33
UBE3BQ7Z3V4 AL356441.2-201ENST00000443009 864 ntBASIC29.63■■■□□ 2.33
UBE3BQ7Z3V4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC29.63■■■□□ 2.33
UBE3BQ7Z3V4 AC011551.1-201ENST00000614101 683 ntBASIC29.63■■■□□ 2.33
UBE3BQ7Z3V4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
UBE3BQ7Z3V4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
UBE3BQ7Z3V4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
UBE3BQ7Z3V4 GAK-223ENST00000628912 497 ntTSL 5 BASIC29.62■■■□□ 2.33
UBE3BQ7Z3V4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
UBE3BQ7Z3V4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
UBE3BQ7Z3V4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
UBE3BQ7Z3V4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC29.6■■■□□ 2.33
UBE3BQ7Z3V4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
UBE3BQ7Z3V4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC29.6■■■□□ 2.33
UBE3BQ7Z3V4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC29.6■■■□□ 2.33
UBE3BQ7Z3V4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC29.6■■■□□ 2.33
UBE3BQ7Z3V4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
UBE3BQ7Z3V4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
UBE3BQ7Z3V4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC29.59■■■□□ 2.33
UBE3BQ7Z3V4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC29.59■■■□□ 2.33
UBE3BQ7Z3V4 AC021242.3-201ENST00000607598 1377 ntBASIC29.59■■■□□ 2.33
UBE3BQ7Z3V4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
UBE3BQ7Z3V4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
UBE3BQ7Z3V4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
UBE3BQ7Z3V4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
UBE3BQ7Z3V4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
UBE3BQ7Z3V4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC29.58■■■□□ 2.33
UBE3BQ7Z3V4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
UBE3BQ7Z3V4 AC131212.1-201ENST00000613771 668 ntBASIC29.58■■■□□ 2.33
UBE3BQ7Z3V4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
UBE3BQ7Z3V4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC29.57■■■□□ 2.32
UBE3BQ7Z3V4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC29.57■■■□□ 2.32
UBE3BQ7Z3V4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
UBE3BQ7Z3V4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
UBE3BQ7Z3V4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC29.56■■■□□ 2.32
UBE3BQ7Z3V4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
UBE3BQ7Z3V4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC29.56■■■□□ 2.32
UBE3BQ7Z3V4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
UBE3BQ7Z3V4 UNC93B8-201ENST00000511903 705 ntBASIC29.56■■■□□ 2.32
UBE3BQ7Z3V4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
UBE3BQ7Z3V4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
UBE3BQ7Z3V4 AC091060.1-201ENST00000623524 1766 ntBASIC29.56■■■□□ 2.32
UBE3BQ7Z3V4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
UBE3BQ7Z3V4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC29.55■■■□□ 2.32
UBE3BQ7Z3V4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
UBE3BQ7Z3V4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
UBE3BQ7Z3V4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
UBE3BQ7Z3V4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC29.55■■■□□ 2.32
UBE3BQ7Z3V4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
UBE3BQ7Z3V4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC29.54■■■□□ 2.32
UBE3BQ7Z3V4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
UBE3BQ7Z3V4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
UBE3BQ7Z3V4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC29.54■■■□□ 2.32
UBE3BQ7Z3V4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
UBE3BQ7Z3V4 DUSP8P4-201ENST00000399538 1761 ntBASIC29.54■■■□□ 2.32
UBE3BQ7Z3V4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
UBE3BQ7Z3V4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
UBE3BQ7Z3V4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
UBE3BQ7Z3V4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
UBE3BQ7Z3V4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
UBE3BQ7Z3V4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC29.53■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms