Protein–RNA interactions for Protein: Q6X4T0

C12orf54, Uncharacterized protein C12orf54, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54Q6X4T0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
C12orf54Q6X4T0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C12orf54Q6X4T0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.92■□□□□ 0.62
C12orf54Q6X4T0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.92■□□□□ 0.62
C12orf54Q6X4T0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.92■□□□□ 0.62
C12orf54Q6X4T0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C12orf54Q6X4T0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
C12orf54Q6X4T0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C12orf54Q6X4T0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
C12orf54Q6X4T0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C12orf54Q6X4T0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.91■□□□□ 0.62
C12orf54Q6X4T0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
C12orf54Q6X4T0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C12orf54Q6X4T0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C12orf54Q6X4T0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.91■□□□□ 0.62
C12orf54Q6X4T0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.91■□□□□ 0.62
C12orf54Q6X4T0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
C12orf54Q6X4T0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C12orf54Q6X4T0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C12orf54Q6X4T0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C12orf54Q6X4T0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
C12orf54Q6X4T0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.9■□□□□ 0.62
C12orf54Q6X4T0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
C12orf54Q6X4T0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
C12orf54Q6X4T0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C12orf54Q6X4T0 PBX2P1-201ENST00000493219 1291 ntBASIC18.9■□□□□ 0.62
C12orf54Q6X4T0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C12orf54Q6X4T0 MIR4466-201ENST00000606121 54 ntBASIC18.9■□□□□ 0.62
C12orf54Q6X4T0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C12orf54Q6X4T0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C12orf54Q6X4T0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.89■□□□□ 0.62
C12orf54Q6X4T0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.89■□□□□ 0.61
C12orf54Q6X4T0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C12orf54Q6X4T0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.89■□□□□ 0.61
C12orf54Q6X4T0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
C12orf54Q6X4T0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C12orf54Q6X4T0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
C12orf54Q6X4T0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.89■□□□□ 0.61
C12orf54Q6X4T0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.88■□□□□ 0.61
C12orf54Q6X4T0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C12orf54Q6X4T0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C12orf54Q6X4T0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
C12orf54Q6X4T0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C12orf54Q6X4T0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C12orf54Q6X4T0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
C12orf54Q6X4T0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C12orf54Q6X4T0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C12orf54Q6X4T0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.88■□□□□ 0.61
C12orf54Q6X4T0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
C12orf54Q6X4T0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
C12orf54Q6X4T0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.88■□□□□ 0.61
C12orf54Q6X4T0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
C12orf54Q6X4T0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C12orf54Q6X4T0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C12orf54Q6X4T0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C12orf54Q6X4T0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
C12orf54Q6X4T0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
C12orf54Q6X4T0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.87■□□□□ 0.61
C12orf54Q6X4T0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C12orf54Q6X4T0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
C12orf54Q6X4T0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.87■□□□□ 0.61
C12orf54Q6X4T0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.87■□□□□ 0.61
C12orf54Q6X4T0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
C12orf54Q6X4T0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.87■□□□□ 0.61
C12orf54Q6X4T0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
C12orf54Q6X4T0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
C12orf54Q6X4T0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
C12orf54Q6X4T0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C12orf54Q6X4T0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
C12orf54Q6X4T0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.86■□□□□ 0.61
C12orf54Q6X4T0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.86■□□□□ 0.61
C12orf54Q6X4T0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.86■□□□□ 0.61
C12orf54Q6X4T0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C12orf54Q6X4T0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C12orf54Q6X4T0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.86■□□□□ 0.61
C12orf54Q6X4T0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
C12orf54Q6X4T0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C12orf54Q6X4T0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
C12orf54Q6X4T0 AC135279.3-201ENST00000610945 1311 ntBASIC18.85■□□□□ 0.61
C12orf54Q6X4T0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
C12orf54Q6X4T0 AC026271.2-201ENST00000428091 497 ntBASIC18.85■□□□□ 0.61
C12orf54Q6X4T0 AC106739.1-201ENST00000617035 715 ntBASIC18.85■□□□□ 0.61
C12orf54Q6X4T0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.85■□□□□ 0.61
C12orf54Q6X4T0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C12orf54Q6X4T0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C12orf54Q6X4T0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
C12orf54Q6X4T0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
C12orf54Q6X4T0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
C12orf54Q6X4T0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.84■□□□□ 0.61
C12orf54Q6X4T0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C12orf54Q6X4T0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
C12orf54Q6X4T0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
C12orf54Q6X4T0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.84■□□□□ 0.61
C12orf54Q6X4T0 MIR4281-201ENST00000580852 62 ntBASIC18.84■□□□□ 0.61
C12orf54Q6X4T0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.84■□□□□ 0.61
C12orf54Q6X4T0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.84■□□□□ 0.61
C12orf54Q6X4T0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
C12orf54Q6X4T0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
C12orf54Q6X4T0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
C12orf54Q6X4T0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms