Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 HEM3YDL205C 984 nt5.69□□□□□ -1.5
RUP1Q12242 YDR053WYDR053W 396 nt5.69□□□□□ -1.5
RUP1Q12242 SNZ3YFL059W 897 nt5.69□□□□□ -1.5
RUP1Q12242 YIR020W-AYIR020W-A 243 nt5.69□□□□□ -1.5
RUP1Q12242 SNZ2YNL333W 897 nt5.69□□□□□ -1.5
RUP1Q12242 MLC2YPR188C 492 nt5.69□□□□□ -1.5
RUP1Q12242 RAD24YER173W 1980 nt5.69□□□□□ -1.5
RUP1Q12242 HIS7YBR248C 1659 nt5.69□□□□□ -1.5
RUP1Q12242 GUF1YLR289W 1938 nt5.68□□□□□ -1.5
RUP1Q12242 LEU5YHR002W 1074 nt5.68□□□□□ -1.5
RUP1Q12242 LYS12YIL094C 1116 nt5.68□□□□□ -1.5
RUP1Q12242 YJL193WYJL193W 1209 nt5.68□□□□□ -1.5
RUP1Q12242 YPR098CYPR098C 486 nt5.68□□□□□ -1.5
RUP1Q12242 TRP5YGL026C 2124 nt5.68□□□□□ -1.5
RUP1Q12242 YMR027WYMR027W 1413 nt5.67□□□□□ -1.5
RUP1Q12242 SIA1YOR137C 1869 nt5.67□□□□□ -1.5
RUP1Q12242 PDC1YLR044C 1692 nt5.67□□□□□ -1.5
RUP1Q12242 YDL023CYDL023C 321 nt5.67□□□□□ -1.5
RUP1Q12242 UGX2YDL169C 672 nt5.67□□□□□ -1.5
RUP1Q12242 MED6YHR058C 888 nt5.67□□□□□ -1.5
RUP1Q12242 SFC1YJR095W 969 nt5.67□□□□□ -1.5
RUP1Q12242 CBT1YKL208W 816 nt5.67□□□□□ -1.5
RUP1Q12242 IRS4YKR019C 1848 nt5.67□□□□□ -1.5
RUP1Q12242 SEC12YNR026C 1416 nt5.66□□□□□ -1.5
RUP1Q12242 YAP1801YHR161C 1914 nt5.66□□□□□ -1.5
RUP1Q12242 PHB1YGR132C 864 nt5.66□□□□□ -1.5
RUP1Q12242 YKL031WYKL031W 414 nt5.66□□□□□ -1.5
RUP1Q12242 MSS1YMR023C 1581 nt5.66□□□□□ -1.5
RUP1Q12242 ADE12YNL220W 1302 nt5.66□□□□□ -1.5
RUP1Q12242 PRI2YKL045W 1587 nt5.65□□□□□ -1.5
RUP1Q12242 DEF1YKL054C 2217 nt5.65□□□□□ -1.5
RUP1Q12242 DJP1YIR004W 1299 nt5.65□□□□□ -1.5
RUP1Q12242 CIN4YMR138W 576 nt5.65□□□□□ -1.5
RUP1Q12242 YNL067W-AYNL067W-A 147 nt5.65□□□□□ -1.5
RUP1Q12242 ENV7YPL236C 1095 nt5.65□□□□□ -1.5
RUP1Q12242 YML082WYML082W 1950 nt5.65□□□□□ -1.51
RUP1Q12242 AMD1YML035C 2433 nt5.65□□□□□ -1.51
RUP1Q12242 VNX1YNL321W 2727 nt5.64□□□□□ -1.51
RUP1Q12242 HPF1YOL155C 2904 nt5.64□□□□□ -1.51
RUP1Q12242 YDR109CYDR109C 2148 nt5.64□□□□□ -1.51
RUP1Q12242 COX20YDR231C 618 nt5.64□□□□□ -1.51
RUP1Q12242 TFB4YPR056W 1017 nt5.64□□□□□ -1.51
RUP1Q12242 MRPS5YBR251W 924 nt5.64□□□□□ -1.51
RUP1Q12242 ISN1YOR155C 1353 nt5.64□□□□□ -1.51
RUP1Q12242 SIT4YDL047W 936 nt5.63□□□□□ -1.51
RUP1Q12242 YBR124WYBR124W 360 nt5.63□□□□□ -1.51
RUP1Q12242 MSS116YDR194C 1995 nt5.63□□□□□ -1.51
RUP1Q12242 MNS1YJR131W 1650 nt5.63□□□□□ -1.51
RUP1Q12242 ECM19YLR390W 339 nt5.62□□□□□ -1.51
RUP1Q12242 UBX2YML013W 1755 nt5.62□□□□□ -1.51
RUP1Q12242 YML012C-AYML012C-A 378 nt5.61□□□□□ -1.51
RUP1Q12242 RPT4YOR259C 1314 nt5.61□□□□□ -1.51
RUP1Q12242 UIP4YPL186C 915 nt5.61□□□□□ -1.51
RUP1Q12242 APE3YBR286W 1614 nt5.61□□□□□ -1.51
RUP1Q12242 YME1YPR024W 2244 nt5.6□□□□□ -1.51
RUP1Q12242 CNM67YNL225C 1746 nt5.6□□□□□ -1.51
RUP1Q12242 PDH1YPR002W 1551 nt5.6□□□□□ -1.51
RUP1Q12242 RPT2YDL007W 1314 nt5.6□□□□□ -1.51
RUP1Q12242 PRS1YKL181W 1284 nt5.6□□□□□ -1.51
RUP1Q12242 PGA2YNL149C 390 nt5.6□□□□□ -1.51
RUP1Q12242 CST6YIL036W 1764 nt5.6□□□□□ -1.51
RUP1Q12242 UBC11YOR339C 471 nt5.59□□□□□ -1.51
RUP1Q12242 MRP51YPL118W 1035 nt5.59□□□□□ -1.51
RUP1Q12242 NRD1YNL251C 1728 nt5.59□□□□□ -1.51
RUP1Q12242 MAL11YGR289C 1851 nt5.58□□□□□ -1.52
RUP1Q12242 SEC20YDR498C 1152 nt5.58□□□□□ -1.52
RUP1Q12242 PRS2YER099C 957 nt5.58□□□□□ -1.52
RUP1Q12242 YLR126CYLR126C 756 nt5.58□□□□□ -1.52
RUP1Q12242 HCR1YLR192C 798 nt5.58□□□□□ -1.52
RUP1Q12242 APM4YOL062C 1476 nt5.58□□□□□ -1.52
RUP1Q12242 HAP1YLR256W 4509 nt5.57□□□□□ -1.52
RUP1Q12242 ASN1YPR145W 1719 nt5.57□□□□□ -1.52
RUP1Q12242 MDH3YDL078C 1032 nt5.57□□□□□ -1.52
RUP1Q12242 ATO3YDR384C 828 nt5.57□□□□□ -1.52
RUP1Q12242 DFM1YDR411C 1026 nt5.57□□□□□ -1.52
RUP1Q12242 VRP1YLR337C 2454 nt5.57□□□□□ -1.52
RUP1Q12242 PAP1YKR002W 1707 nt5.57□□□□□ -1.52
RUP1Q12242 SSZ1YHR064C 1617 nt5.56□□□□□ -1.52
RUP1Q12242 YDL022C-AYDL022C-A 249 nt5.56□□□□□ -1.52
RUP1Q12242 TRP1YDR007W 675 nt5.56□□□□□ -1.52
RUP1Q12242 YER010CYER010C 705 nt5.56□□□□□ -1.52
RUP1Q12242 MRPL15YLR312W-A 762 nt5.56□□□□□ -1.52
RUP1Q12242 STL1YDR536W 1710 nt5.56□□□□□ -1.52
RUP1Q12242 PIF1YML061C 2580 nt5.56□□□□□ -1.52
RUP1Q12242 COR1YBL045C 1374 nt5.55□□□□□ -1.52
RUP1Q12242 NOP7YGR103W 1818 nt5.55□□□□□ -1.52
RUP1Q12242 GLO2YDR272W 825 nt5.55□□□□□ -1.52
RUP1Q12242 CDC43YGL155W 1131 nt5.55□□□□□ -1.52
RUP1Q12242 SSY5YJL156C 2100 nt5.55□□□□□ -1.52
RUP1Q12242 YKR041WYKR041W 753 nt5.55□□□□□ -1.52
RUP1Q12242 YBR144CYBR144C 315 nt5.55□□□□□ -1.52
RUP1Q12242 PCS60YBR222C 1632 nt5.55□□□□□ -1.52
RUP1Q12242 BAP2YBR068C 1830 nt5.55□□□□□ -1.52
RUP1Q12242 RAT1YOR048C 3021 nt5.55□□□□□ -1.52
RUP1Q12242 BNA5YLR231C 1362 nt5.55□□□□□ -1.52
RUP1Q12242 FRE3YOR381W 2136 nt5.54□□□□□ -1.52
RUP1Q12242 HFI1YPL254W 1467 nt5.54□□□□□ -1.52
RUP1Q12242 AAD15YOL165C 432 nt5.54□□□□□ -1.52
RUP1Q12242 ATG12YBR217W 561 nt5.54□□□□□ -1.52
RUP1Q12242 UTP18YJL069C 1785 nt5.54□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms