Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 PFA3YNL326C 1011 nt6.45□□□□□ -1.38
SSL2Q00578 MSS116YDR194C 1995 nt6.44□□□□□ -1.38
SSL2Q00578 MID1YNL291C 1647 nt6.44□□□□□ -1.38
SSL2Q00578 YDL023CYDL023C 321 nt6.44□□□□□ -1.38
SSL2Q00578 ATG7YHR171W 1893 nt6.44□□□□□ -1.38
SSL2Q00578 NTE1YML059C 5040 nt6.43□□□□□ -1.38
SSL2Q00578 YMR027WYMR027W 1413 nt6.43□□□□□ -1.38
SSL2Q00578 SAC6YDR129C 1929 nt6.43□□□□□ -1.38
SSL2Q00578 LEU5YHR002W 1074 nt6.43□□□□□ -1.38
SSL2Q00578 PEX12YMR026C 1200 nt6.43□□□□□ -1.38
SSL2Q00578 YMR114CYMR114C 1107 nt6.43□□□□□ -1.38
SSL2Q00578 YNR048WYNR048W 1182 nt6.43□□□□□ -1.38
SSL2Q00578 PIF1YML061C 2580 nt6.43□□□□□ -1.38
SSL2Q00578 MCM6YGL201C 3054 nt6.43□□□□□ -1.38
SSL2Q00578 SMF2YHR050W 1650 nt6.42□□□□□ -1.38
SSL2Q00578 REV7YIL139C 738 nt6.42□□□□□ -1.38
SSL2Q00578 APS3YJL024C 585 nt6.42□□□□□ -1.38
SSL2Q00578 SLD7YOR060C 774 nt6.42□□□□□ -1.38
SSL2Q00578 ADE12YNL220W 1302 nt6.42□□□□□ -1.38
SSL2Q00578 TBF1YPL128C 1689 nt6.42□□□□□ -1.38
SSL2Q00578 CDS1YBR029C 1374 nt6.42□□□□□ -1.38
SSL2Q00578 YKL223WYKL223W 333 nt6.41□□□□□ -1.38
SSL2Q00578 RNH201YNL072W 924 nt6.41□□□□□ -1.38
SSL2Q00578 YOL079WYOL079W 399 nt6.41□□□□□ -1.38
SSL2Q00578 SVF1YDR346C 1446 nt6.41□□□□□ -1.38
SSL2Q00578 IDP1YDL066W 1287 nt6.4□□□□□ -1.38
SSL2Q00578 YDL129WYDL129W 876 nt6.4□□□□□ -1.38
SSL2Q00578 SFC1YJR095W 969 nt6.4□□□□□ -1.38
SSL2Q00578 GCV3YAL044C 513 nt6.4□□□□□ -1.38
SSL2Q00578 TAF11YML015C 1041 nt6.4□□□□□ -1.38
SSL2Q00578 POR1YNL055C 852 nt6.4□□□□□ -1.38
SSL2Q00578 MLC2YPR188C 492 nt6.4□□□□□ -1.38
SSL2Q00578 RRT2YBR246W 1164 nt6.4□□□□□ -1.38
SSL2Q00578 LSG1YGL099W 1923 nt6.4□□□□□ -1.39
SSL2Q00578 RAT1YOR048C 3021 nt6.4□□□□□ -1.39
SSL2Q00578 VRP1YLR337C 2454 nt6.39□□□□□ -1.39
SSL2Q00578 SRP101YDR292C 1866 nt6.39□□□□□ -1.39
SSL2Q00578 RFA1YAR007C 1866 nt6.39□□□□□ -1.39
SSL2Q00578 AVO2YMR068W 1281 nt6.39□□□□□ -1.39
SSL2Q00578 RPS9AYPL081W 594 nt6.39□□□□□ -1.39
SSL2Q00578 YDL022C-AYDL022C-A 249 nt6.38□□□□□ -1.39
SSL2Q00578 YIR020W-AYIR020W-A 243 nt6.38□□□□□ -1.39
SSL2Q00578 HSP150YJL159W 1242 nt6.38□□□□□ -1.39
SSL2Q00578 YLR317WYLR317W 435 nt6.38□□□□□ -1.39
SSL2Q00578 YBR144CYBR144C 315 nt6.38□□□□□ -1.39
SSL2Q00578 MNS1YJR131W 1650 nt6.38□□□□□ -1.39
SSL2Q00578 HXT15YDL245C 1704 nt6.38□□□□□ -1.39
SSL2Q00578 HXT16YJR158W 1704 nt6.38□□□□□ -1.39
SSL2Q00578 RIM101YHL027W 1878 nt6.38□□□□□ -1.39
SSL2Q00578 VNX1YNL321W 2727 nt6.37□□□□□ -1.39
SSL2Q00578 MKK2YPL140C 1521 nt6.37□□□□□ -1.39
SSL2Q00578 BUD32YGR262C 786 nt6.37□□□□□ -1.39
SSL2Q00578 YML012C-AYML012C-A 378 nt6.37□□□□□ -1.39
SSL2Q00578 YPL168WYPL168W 1293 nt6.37□□□□□ -1.39
SSL2Q00578 YPR098CYPR098C 486 nt6.37□□□□□ -1.39
SSL2Q00578 YRF1-4YLR466W 4149 nt6.36□□□□□ -1.39
SSL2Q00578 COR1YBL045C 1374 nt6.36□□□□□ -1.39
SSL2Q00578 RRP4YHR069C 1080 nt6.36□□□□□ -1.39
SSL2Q00578 SRY1YKL218C 981 nt6.36□□□□□ -1.39
SSL2Q00578 GEX1YCL073C 1848 nt6.36□□□□□ -1.39
SSL2Q00578 GEX2YKR106W 1848 nt6.36□□□□□ -1.39
SSL2Q00578 YME1YPR024W 2244 nt6.35□□□□□ -1.39
SSL2Q00578 MSS1YMR023C 1581 nt6.35□□□□□ -1.39
SSL2Q00578 GPA2YER020W 1350 nt6.35□□□□□ -1.39
SSL2Q00578 YER010CYER010C 705 nt6.35□□□□□ -1.39
SSL2Q00578 SIP2YGL208W 1248 nt6.35□□□□□ -1.39
SSL2Q00578 YLR036CYLR036C 612 nt6.35□□□□□ -1.39
SSL2Q00578 RHO2YNL090W 579 nt6.35□□□□□ -1.39
SSL2Q00578 YNL097W-AYNL097W-A 156 nt6.35□□□□□ -1.39
SSL2Q00578 snR34snR34 203 nt6.35□□□□□ -1.39
SSL2Q00578 YNL247WYNL247W 2304 nt6.34□□□□□ -1.39
SSL2Q00578 SEC12YNR026C 1416 nt6.34□□□□□ -1.39
SSL2Q00578 GPT2YKR067W 2232 nt6.34□□□□□ -1.39
SSL2Q00578 GUS1YGL245W 2127 nt6.34□□□□□ -1.39
SSL2Q00578 QNS1YHR074W 2145 nt6.34□□□□□ -1.39
SSL2Q00578 ISR1YPR106W 1332 nt6.34□□□□□ -1.39
SSL2Q00578 PSH1YOL054W 1221 nt6.34□□□□□ -1.39
SSL2Q00578 CSG2YBR036C 1233 nt6.34□□□□□ -1.39
SSL2Q00578 YPR160C-AYPR160C-A 285 nt6.34□□□□□ -1.39
SSL2Q00578 PDH1YPR002W 1551 nt6.34□□□□□ -1.39
SSL2Q00578 STL1YDR536W 1710 nt6.33□□□□□ -1.4
SSL2Q00578 SKN1YGR143W 2316 nt6.33□□□□□ -1.4
SSL2Q00578 YDL114WYDL114W 927 nt6.33□□□□□ -1.4
SSL2Q00578 YHR140WYHR140W 720 nt6.33□□□□□ -1.4
SSL2Q00578 YIL077CYIL077C 963 nt6.33□□□□□ -1.4
SSL2Q00578 RPN7YPR108W 1290 nt6.33□□□□□ -1.4
SSL2Q00578 SKS1YPL026C 1509 nt6.33□□□□□ -1.4
SSL2Q00578 YEL020CYEL020C 1683 nt6.33□□□□□ -1.4
SSL2Q00578 AIM17YHL021C 1398 nt6.32□□□□□ -1.4
SSL2Q00578 HSP104YLL026W 2727 nt6.32□□□□□ -1.4
SSL2Q00578 BUL1YMR275C 2931 nt6.32□□□□□ -1.4
SSL2Q00578 VCX1YDL128W 1236 nt6.32□□□□□ -1.4
SSL2Q00578 CWC21YDR482C 408 nt6.32□□□□□ -1.4
SSL2Q00578 SNZ3YFL059W 897 nt6.32□□□□□ -1.4
SSL2Q00578 RSA3YLR221C 663 nt6.32□□□□□ -1.4
SSL2Q00578 SNZ2YNL333W 897 nt6.32□□□□□ -1.4
SSL2Q00578 PRP46YPL151C 1356 nt6.31□□□□□ -1.4
SSL2Q00578 YBR138CYBR138C 1575 nt6.31□□□□□ -1.4
SSL2Q00578 DBP9YLR276C 1785 nt6.31□□□□□ -1.4
SSL2Q00578 CLP1YOR250C 1338 nt6.31□□□□□ -1.4
Retrieved 100 of 7,029 protein–RNA pairs in 9.6 ms