Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
GABREP78334 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.6■■□□□ 1.21
GABREP78334 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
GABREP78334 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.6■■□□□ 1.21
GABREP78334 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.6■■□□□ 1.21
GABREP78334 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
GABREP78334 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
GABREP78334 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
GABREP78334 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
GABREP78334 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
GABREP78334 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.59■■□□□ 1.21
GABREP78334 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
GABREP78334 AC133561.4-201ENST00000566112 224 ntBASIC22.59■■□□□ 1.21
GABREP78334 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
GABREP78334 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
GABREP78334 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
GABREP78334 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
GABREP78334 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.58■■□□□ 1.21
GABREP78334 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.58■■□□□ 1.21
GABREP78334 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.58■■□□□ 1.21
GABREP78334 AL512631.2-201ENST00000604634 923 ntBASIC22.58■■□□□ 1.21
GABREP78334 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
GABREP78334 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
GABREP78334 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GABREP78334 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GABREP78334 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
GABREP78334 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
GABREP78334 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
GABREP78334 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.57■■□□□ 1.2
GABREP78334 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.57■■□□□ 1.2
GABREP78334 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
GABREP78334 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
GABREP78334 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
GABREP78334 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
GABREP78334 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
GABREP78334 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.56■■□□□ 1.2
GABREP78334 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.56■■□□□ 1.2
GABREP78334 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
GABREP78334 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
GABREP78334 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
GABREP78334 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
GABREP78334 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
GABREP78334 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
GABREP78334 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
GABREP78334 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
GABREP78334 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.54■■□□□ 1.2
GABREP78334 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.54■■□□□ 1.2
GABREP78334 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.54■■□□□ 1.2
GABREP78334 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
GABREP78334 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
GABREP78334 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.53■■□□□ 1.2
GABREP78334 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
GABREP78334 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
GABREP78334 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
GABREP78334 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.53■■□□□ 1.2
GABREP78334 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
GABREP78334 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
GABREP78334 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
GABREP78334 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
GABREP78334 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.52■■□□□ 1.2
GABREP78334 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
GABREP78334 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.52■■□□□ 1.2
GABREP78334 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.52■■□□□ 1.2
GABREP78334 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
GABREP78334 AP004609.3-201ENST00000610705 1884 ntBASIC22.51■■□□□ 1.19
GABREP78334 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
GABREP78334 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
GABREP78334 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
GABREP78334 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
GABREP78334 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
GABREP78334 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
GABREP78334 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
GABREP78334 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
GABREP78334 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
GABREP78334 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.5■■□□□ 1.19
GABREP78334 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
GABREP78334 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
GABREP78334 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
GABREP78334 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
GABREP78334 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
GABREP78334 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
GABREP78334 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.49■■□□□ 1.19
GABREP78334 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
GABREP78334 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.49■■□□□ 1.19
GABREP78334 PBX2P1-201ENST00000493219 1291 ntBASIC22.49■■□□□ 1.19
GABREP78334 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
GABREP78334 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.49■■□□□ 1.19
GABREP78334 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.49■■□□□ 1.19
GABREP78334 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.48■■□□□ 1.19
GABREP78334 ZNRF2P3-201ENST00000424200 374 ntBASIC22.48■■□□□ 1.19
GABREP78334 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
GABREP78334 AC142381.2-201ENST00000566120 298 ntBASIC22.48■■□□□ 1.19
GABREP78334 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.48■■□□□ 1.19
GABREP78334 AC106739.1-201ENST00000617035 715 ntBASIC22.48■■□□□ 1.19
GABREP78334 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
GABREP78334 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
GABREP78334 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
GABREP78334 AF131216.4-201ENST00000638924 1588 ntBASIC22.47■■□□□ 1.19
GABREP78334 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
GABREP78334 RARRES2P6-201ENST00000567333 442 ntBASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms