Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.11■□□□□ 0.81
UBA52P62987 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.11■□□□□ 0.81
UBA52P62987 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBA52P62987 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.11■□□□□ 0.81
UBA52P62987 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.11■□□□□ 0.81
UBA52P62987 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBA52P62987 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBA52P62987 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBA52P62987 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.1■□□□□ 0.81
UBA52P62987 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBA52P62987 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.1■□□□□ 0.81
UBA52P62987 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.1■□□□□ 0.81
UBA52P62987 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBA52P62987 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBA52P62987 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBA52P62987 AC009831.1-201ENST00000580420 1582 ntBASIC20.09■□□□□ 0.81
UBA52P62987 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBA52P62987 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.09■□□□□ 0.81
UBA52P62987 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
UBA52P62987 AL592293.1-201ENST00000502889 1188 ntBASIC20.09■□□□□ 0.81
UBA52P62987 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBA52P62987 DUX4L18-201ENST00000553347 1267 ntBASIC20.09■□□□□ 0.81
UBA52P62987 AC133552.2-201ENST00000619106 1032 ntBASIC20.09■□□□□ 0.81
UBA52P62987 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
UBA52P62987 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBA52P62987 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBA52P62987 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.08■□□□□ 0.81
UBA52P62987 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UBA52P62987 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
UBA52P62987 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UBA52P62987 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBA52P62987 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBA52P62987 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.07■□□□□ 0.8
UBA52P62987 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBA52P62987 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
UBA52P62987 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBA52P62987 AC138932.3-201ENST00000567634 1902 ntBASIC20.07■□□□□ 0.8
UBA52P62987 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBA52P62987 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBA52P62987 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBA52P62987 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBA52P62987 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
UBA52P62987 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBA52P62987 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBA52P62987 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBA52P62987 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBA52P62987 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBA52P62987 SMPD5-203ENST00000639008 1464 ntBASIC20.05■□□□□ 0.8
UBA52P62987 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBA52P62987 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBA52P62987 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBA52P62987 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.05■□□□□ 0.8
UBA52P62987 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.05■□□□□ 0.8
UBA52P62987 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBA52P62987 AP004609.3-201ENST00000610705 1884 ntBASIC20.05■□□□□ 0.8
UBA52P62987 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBA52P62987 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBA52P62987 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBA52P62987 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
UBA52P62987 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBA52P62987 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBA52P62987 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBA52P62987 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
UBA52P62987 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBA52P62987 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.04■□□□□ 0.8
UBA52P62987 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
UBA52P62987 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.03■□□□□ 0.8
UBA52P62987 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBA52P62987 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBA52P62987 AL359258.2-201ENST00000564063 1566 ntBASIC20.03■□□□□ 0.8
UBA52P62987 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBA52P62987 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBA52P62987 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBA52P62987 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.03■□□□□ 0.8
UBA52P62987 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.02■□□□□ 0.8
UBA52P62987 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBA52P62987 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBA52P62987 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
UBA52P62987 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
UBA52P62987 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBA52P62987 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.02■□□□□ 0.8
UBA52P62987 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBA52P62987 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBA52P62987 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
UBA52P62987 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.01■□□□□ 0.79
UBA52P62987 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBA52P62987 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBA52P62987 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBA52P62987 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBA52P62987 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.01■□□□□ 0.79
UBA52P62987 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBA52P62987 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBA52P62987 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBA52P62987 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBA52P62987 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20■□□□□ 0.79
UBA52P62987 AC022211.4-201ENST00000625094 2161 ntBASIC20■□□□□ 0.79
UBA52P62987 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UBA52P62987 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
UBA52P62987 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBA52P62987 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms