Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
EIF4A1P60842 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
EIF4A1P60842 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.57■■■□□ 2.48
EIF4A1P60842 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
EIF4A1P60842 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
EIF4A1P60842 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
EIF4A1P60842 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
EIF4A1P60842 AC097639.1-201ENST00000565519 1891 ntBASIC30.56■■■□□ 2.48
EIF4A1P60842 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
EIF4A1P60842 AC021242.3-201ENST00000607598 1377 ntBASIC30.55■■■□□ 2.48
EIF4A1P60842 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC30.55■■■□□ 2.48
EIF4A1P60842 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.55■■■□□ 2.48
EIF4A1P60842 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.54■■■□□ 2.48
EIF4A1P60842 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.54■■■□□ 2.48
EIF4A1P60842 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
EIF4A1P60842 KRT125P-201ENST00000546827 989 ntBASIC30.54■■■□□ 2.48
EIF4A1P60842 AC011551.1-201ENST00000614101 683 ntBASIC30.54■■■□□ 2.48
EIF4A1P60842 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
EIF4A1P60842 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
EIF4A1P60842 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
EIF4A1P60842 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
EIF4A1P60842 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
EIF4A1P60842 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
EIF4A1P60842 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
EIF4A1P60842 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.52■■■□□ 2.48
EIF4A1P60842 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.52■■■□□ 2.48
EIF4A1P60842 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
EIF4A1P60842 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
EIF4A1P60842 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
EIF4A1P60842 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
EIF4A1P60842 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
EIF4A1P60842 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
EIF4A1P60842 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
EIF4A1P60842 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
EIF4A1P60842 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
EIF4A1P60842 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC30.5■■■□□ 2.47
EIF4A1P60842 UNC93B8-201ENST00000511903 705 ntBASIC30.5■■■□□ 2.47
EIF4A1P60842 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.5■■■□□ 2.47
EIF4A1P60842 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
EIF4A1P60842 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC30.49■■■□□ 2.47
EIF4A1P60842 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.49■■■□□ 2.47
EIF4A1P60842 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
EIF4A1P60842 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC30.49■■■□□ 2.47
EIF4A1P60842 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
EIF4A1P60842 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.49■■■□□ 2.47
EIF4A1P60842 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.49■■■□□ 2.47
EIF4A1P60842 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
EIF4A1P60842 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
EIF4A1P60842 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
EIF4A1P60842 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.49■■■□□ 2.47
EIF4A1P60842 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC30.48■■■□□ 2.47
EIF4A1P60842 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC30.48■■■□□ 2.47
EIF4A1P60842 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.48■■■□□ 2.47
EIF4A1P60842 AC131212.1-201ENST00000613771 668 ntBASIC30.48■■■□□ 2.47
EIF4A1P60842 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
EIF4A1P60842 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
EIF4A1P60842 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
EIF4A1P60842 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
EIF4A1P60842 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC30.47■■■□□ 2.47
EIF4A1P60842 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.47■■■□□ 2.47
EIF4A1P60842 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
EIF4A1P60842 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
EIF4A1P60842 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
EIF4A1P60842 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.46■■■□□ 2.47
EIF4A1P60842 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.46■■■□□ 2.47
EIF4A1P60842 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
EIF4A1P60842 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
EIF4A1P60842 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.47
EIF4A1P60842 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.45■■■□□ 2.47
EIF4A1P60842 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
EIF4A1P60842 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.45■■■□□ 2.46
EIF4A1P60842 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.46
EIF4A1P60842 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
EIF4A1P60842 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.44■■■□□ 2.46
EIF4A1P60842 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
EIF4A1P60842 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.44■■■□□ 2.46
EIF4A1P60842 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.44■■■□□ 2.46
EIF4A1P60842 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
EIF4A1P60842 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
EIF4A1P60842 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
EIF4A1P60842 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
EIF4A1P60842 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
EIF4A1P60842 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.43■■■□□ 2.46
EIF4A1P60842 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.43■■■□□ 2.46
EIF4A1P60842 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.43■■■□□ 2.46
EIF4A1P60842 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.42■■■□□ 2.46
EIF4A1P60842 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC30.42■■■□□ 2.46
EIF4A1P60842 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.42■■■□□ 2.46
EIF4A1P60842 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.42■■■□□ 2.46
EIF4A1P60842 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.42■■■□□ 2.46
EIF4A1P60842 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.42■■■□□ 2.46
EIF4A1P60842 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.42■■■□□ 2.46
EIF4A1P60842 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
EIF4A1P60842 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
EIF4A1P60842 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
EIF4A1P60842 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.41■■■□□ 2.46
EIF4A1P60842 AC092028.1-203ENST00000608262 953 ntBASIC30.41■■■□□ 2.46
EIF4A1P60842 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.41■■■□□ 2.46
EIF4A1P60842 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC30.41■■■□□ 2.46
EIF4A1P60842 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms