Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 PYK2YOR347C 1521 nt5.87□□□□□ -1.47
UPF3P48412 LCB2YDR062W 1686 nt5.87□□□□□ -1.47
UPF3P48412 TUL1YKL034W 2277 nt5.87□□□□□ -1.47
UPF3P48412 KKQ8YKL168C 2175 nt5.86□□□□□ -1.47
UPF3P48412 TEL2YGR099W 2067 nt5.86□□□□□ -1.47
UPF3P48412 LAP2YNL045W 2016 nt5.86□□□□□ -1.47
UPF3P48412 ERG1YGR175C 1491 nt5.86□□□□□ -1.47
UPF3P48412 SUB2YDL084W 1341 nt5.86□□□□□ -1.47
UPF3P48412 VPS4YPR173C 1314 nt5.86□□□□□ -1.47
UPF3P48412 HST4YDR191W 1113 nt5.86□□□□□ -1.47
UPF3P48412 YDR396WYDR396W 501 nt5.86□□□□□ -1.47
UPF3P48412 SPC42YKL042W 1092 nt5.86□□□□□ -1.47
UPF3P48412 TSR3YOR006C 942 nt5.86□□□□□ -1.47
UPF3P48412 RPS28AYOR167C 204 nt5.86□□□□□ -1.47
UPF3P48412 GLN1YPR035W 1113 nt5.86□□□□□ -1.47
UPF3P48412 STE12YHR084W 2067 nt5.86□□□□□ -1.47
UPF3P48412 VPS5YOR069W 2028 nt5.86□□□□□ -1.47
UPF3P48412 YCR006CYCR006C 474 nt5.85□□□□□ -1.47
UPF3P48412 HVG1YER039C 750 nt5.85□□□□□ -1.47
UPF3P48412 PSR2YLR019W 1194 nt5.85□□□□□ -1.47
UPF3P48412 TSA1YML028W 591 nt5.85□□□□□ -1.47
UPF3P48412 MRPL24YMR193W 777 nt5.85□□□□□ -1.47
UPF3P48412 MPP10YJR002W 1782 nt5.85□□□□□ -1.47
UPF3P48412 YDR387CYDR387C 1668 nt5.85□□□□□ -1.47
UPF3P48412 STB5YHR178W 2232 nt5.84□□□□□ -1.47
UPF3P48412 DSF1YEL070W 1509 nt5.84□□□□□ -1.47
UPF3P48412 FRS2YFL022C 1512 nt5.84□□□□□ -1.47
UPF3P48412 YNR073CYNR073C 1509 nt5.84□□□□□ -1.47
UPF3P48412 NUD1YOR373W 2556 nt5.84□□□□□ -1.47
UPF3P48412 COR1YBL045C 1374 nt5.84□□□□□ -1.47
UPF3P48412 HST3YOR025W 1344 nt5.84□□□□□ -1.47
UPF3P48412 YEL068CYEL068C 333 nt5.84□□□□□ -1.47
UPF3P48412 RPN11YFR004W 921 nt5.84□□□□□ -1.47
UPF3P48412 RPL7AYGL076C 735 nt5.84□□□□□ -1.47
UPF3P48412 GTO1YGR154C 1071 nt5.84□□□□□ -1.47
UPF3P48412 tR(ACG)DtR(ACG)D 73 nt5.84□□□□□ -1.47
UPF3P48412 tR(ACG)EtR(ACG)E 73 nt5.84□□□□□ -1.47
UPF3P48412 tR(ACG)KtR(ACG)K 73 nt5.84□□□□□ -1.47
UPF3P48412 tR(ACG)LtR(ACG)L 73 nt5.84□□□□□ -1.47
UPF3P48412 tR(ACG)OtR(ACG)O 73 nt5.84□□□□□ -1.47
UPF3P48412 SUP2tY(GUA)D 75 nt5.84□□□□□ -1.47
UPF3P48412 SUP11tY(GUA)F1 75 nt5.84□□□□□ -1.47
UPF3P48412 SUP6tY(GUA)F2 75 nt5.84□□□□□ -1.47
UPF3P48412 SUP7tY(GUA)J1 75 nt5.84□□□□□ -1.47
UPF3P48412 SUP4tY(GUA)J2 75 nt5.84□□□□□ -1.47
UPF3P48412 SUP5tY(GUA)M1 75 nt5.84□□□□□ -1.47
UPF3P48412 SUP8tY(GUA)M2 75 nt5.84□□□□□ -1.47
UPF3P48412 SUP3tY(GUA)O 75 nt5.84□□□□□ -1.47
UPF3P48412 LDS1YAL018C 978 nt5.84□□□□□ -1.47
UPF3P48412 YMR030W-AYMR030W-A 291 nt5.84□□□□□ -1.47
UPF3P48412 YOL079WYOL079W 399 nt5.84□□□□□ -1.47
UPF3P48412 RPL7BYPL198W 735 nt5.84□□□□□ -1.47
UPF3P48412 HXT3YDR345C 1704 nt5.84□□□□□ -1.47
UPF3P48412 ERG7YHR072W 2196 nt5.83□□□□□ -1.48
UPF3P48412 IML2YJL082W 2196 nt5.83□□□□□ -1.48
UPF3P48412 MRE11YMR224C 2079 nt5.83□□□□□ -1.48
UPF3P48412 VTH1YIL173W 4650 nt5.83□□□□□ -1.48
UPF3P48412 VTH2YJL222W 4650 nt5.83□□□□□ -1.48
UPF3P48412 MAK31YCR020C-A 267 nt5.83□□□□□ -1.48
UPF3P48412 YET3YDL072C 612 nt5.83□□□□□ -1.48
UPF3P48412 MRPL25YGR076C 474 nt5.83□□□□□ -1.48
UPF3P48412 RPE1YJL121C 717 nt5.83□□□□□ -1.48
UPF3P48412 HSP150YJL159W 1242 nt5.83□□□□□ -1.48
UPF3P48412 YJR115WYJR115W 510 nt5.83□□□□□ -1.48
UPF3P48412 MRPS12YNR036C 462 nt5.83□□□□□ -1.48
UPF3P48412 YNR040WYNR040W 771 nt5.83□□□□□ -1.48
UPF3P48412 MRPS16YPL013C 366 nt5.83□□□□□ -1.48
UPF3P48412 YBR124WYBR124W 360 nt5.83□□□□□ -1.48
UPF3P48412 PPR1YLR014C 2715 nt5.83□□□□□ -1.48
UPF3P48412 DBP9YLR276C 1785 nt5.83□□□□□ -1.48
UPF3P48412 HOF1YMR032W 2010 nt5.82□□□□□ -1.48
UPF3P48412 YJL171CYJL171C 1191 nt5.82□□□□□ -1.48
UPF3P48412 YNL285WYNL285W 372 nt5.82□□□□□ -1.48
UPF3P48412 APE1YKL103C 1545 nt5.82□□□□□ -1.48
UPF3P48412 CRZ1YNL027W 2037 nt5.82□□□□□ -1.48
UPF3P48412 YDR132CYDR132C 1488 nt5.82□□□□□ -1.48
UPF3P48412 CLA4YNL298W 2529 nt5.82□□□□□ -1.48
UPF3P48412 ESC8YOL017W 2145 nt5.81□□□□□ -1.48
UPF3P48412 AAP1YHR047C 2571 nt5.81□□□□□ -1.48
UPF3P48412 ASP1YDR321W 1146 nt5.81□□□□□ -1.48
UPF3P48412 YKL107WYKL107W 930 nt5.81□□□□□ -1.48
UPF3P48412 TOM40YMR203W 1164 nt5.81□□□□□ -1.48
UPF3P48412 YNL097W-AYNL097W-A 156 nt5.81□□□□□ -1.48
UPF3P48412 YPR114WYPR114W 948 nt5.81□□□□□ -1.48
UPF3P48412 MDM31YHR194W 1740 nt5.8□□□□□ -1.48
UPF3P48412 YOL035CYOL035C 303 nt5.8□□□□□ -1.48
UPF3P48412 REG2YBR050C 1017 nt5.8□□□□□ -1.48
UPF3P48412 MRP51YPL118W 1035 nt5.8□□□□□ -1.48
UPF3P48412 RPN7YPR108W 1290 nt5.8□□□□□ -1.48
UPF3P48412 NHA1YLR138W 2958 nt5.8□□□□□ -1.48
UPF3P48412 VAM7YGL212W 951 nt5.79□□□□□ -1.48
UPF3P48412 MID2YLR332W 1131 nt5.79□□□□□ -1.48
UPF3P48412 MAC1YMR021C 1254 nt5.79□□□□□ -1.48
UPF3P48412 VMA4YOR332W 702 nt5.79□□□□□ -1.48
UPF3P48412 CLB2YPR119W 1476 nt5.78□□□□□ -1.48
UPF3P48412 YDR034W-BYDR034W-B 156 nt5.78□□□□□ -1.48
UPF3P48412 AAD6YFL056C 639 nt5.78□□□□□ -1.48
UPF3P48412 SPO12YHR152W 522 nt5.78□□□□□ -1.48
UPF3P48412 RNH201YNL072W 924 nt5.78□□□□□ -1.48
UPF3P48412 FSF1YOR271C 984 nt5.78□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 46.8 ms