Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 PPR1YLR014C 2715 nt5.77□□□□□ -1.49
LSM5P40089 UGO1YDR470C 1509 nt5.77□□□□□ -1.49
LSM5P40089 FRS2YFL022C 1512 nt5.77□□□□□ -1.49
LSM5P40089 RGD1YBR260C 2001 nt5.77□□□□□ -1.49
LSM5P40089 PRT1YOR361C 2292 nt5.77□□□□□ -1.49
LSM5P40089 NUD1YOR373W 2556 nt5.76□□□□□ -1.49
LSM5P40089 PFK2YMR205C 2880 nt5.76□□□□□ -1.49
LSM5P40089 YDL144CYDL144C 1071 nt5.76□□□□□ -1.49
LSM5P40089 ARA2YMR041C 1008 nt5.76□□□□□ -1.49
LSM5P40089 ATG12YBR217W 561 nt5.76□□□□□ -1.49
LSM5P40089 COR1YBL045C 1374 nt5.76□□□□□ -1.49
LSM5P40089 SRG1SRG1 551 nt5.75□□□□□ -1.49
LSM5P40089 VAM7YGL212W 951 nt5.75□□□□□ -1.49
LSM5P40089 PHB1YGR132C 864 nt5.75□□□□□ -1.49
LSM5P40089 EGD2YHR193C 525 nt5.75□□□□□ -1.49
LSM5P40089 CCP1YKR066C 1086 nt5.75□□□□□ -1.49
LSM5P40089 MTF1YMR228W 1026 nt5.75□□□□□ -1.49
LSM5P40089 UBC11YOR339C 471 nt5.75□□□□□ -1.49
LSM5P40089 TEP1YNL128W 1305 nt5.74□□□□□ -1.49
LSM5P40089 YEA6YEL006W 1008 nt5.74□□□□□ -1.49
LSM5P40089 IRC7YFR055W 1023 nt5.74□□□□□ -1.49
LSM5P40089 RRT7YLL030C 342 nt5.74□□□□□ -1.49
LSM5P40089 ICT1YLR099C 1185 nt5.74□□□□□ -1.49
LSM5P40089 POP1YNL221C 2628 nt5.74□□□□□ -1.49
LSM5P40089 ACS1YAL054C 2142 nt5.74□□□□□ -1.49
LSM5P40089 MPP10YJR002W 1782 nt5.73□□□□□ -1.49
LSM5P40089 PGK1YCR012W 1251 nt5.73□□□□□ -1.49
LSM5P40089 THI4YGR144W 981 nt5.73□□□□□ -1.49
LSM5P40089 YKL107WYKL107W 930 nt5.73□□□□□ -1.49
LSM5P40089 SNO4YMR322C 714 nt5.73□□□□□ -1.49
LSM5P40089 AAD15YOL165C 432 nt5.73□□□□□ -1.49
LSM5P40089 HSP33YOR391C 714 nt5.73□□□□□ -1.49
LSM5P40089 YBR056C-BYBR056C-B 159 nt5.73□□□□□ -1.49
LSM5P40089 HSP32YPL280W 714 nt5.73□□□□□ -1.49
LSM5P40089 YPR123CYPR123C 435 nt5.73□□□□□ -1.49
LSM5P40089 MRK1YDL079C 1506 nt5.73□□□□□ -1.49
LSM5P40089 CSC1YLR241W 2349 nt5.73□□□□□ -1.49
LSM5P40089 HOF1YMR032W 2010 nt5.72□□□□□ -1.49
LSM5P40089 SUP19tS(UGA)E 82 nt5.72□□□□□ -1.49
LSM5P40089 SUP17tS(UGA)I 82 nt5.72□□□□□ -1.49
LSM5P40089 SUP16tS(UGA)P 82 nt5.72□□□□□ -1.49
LSM5P40089 MRS1YIR021W 1092 nt5.72□□□□□ -1.49
LSM5P40089 YMR030W-AYMR030W-A 291 nt5.72□□□□□ -1.49
LSM5P40089 ADD37YMR184W 597 nt5.72□□□□□ -1.49
LSM5P40089 CWC27YPL064C 906 nt5.72□□□□□ -1.49
LSM5P40089 FRE7YOL152W 1863 nt5.72□□□□□ -1.49
LSM5P40089 CTS2YDR371W 1536 nt5.72□□□□□ -1.49
LSM5P40089 FAA4YMR246W 2085 nt5.71□□□□□ -1.49
LSM5P40089 PUF3YLL013C 2640 nt5.71□□□□□ -1.5
LSM5P40089 RPN11YFR004W 921 nt5.71□□□□□ -1.5
LSM5P40089 PDE1YGL248W 1110 nt5.71□□□□□ -1.5
LSM5P40089 YIL077CYIL077C 963 nt5.71□□□□□ -1.5
LSM5P40089 YML083CYML083C 1257 nt5.71□□□□□ -1.5
LSM5P40089 GLN1YPR035W 1113 nt5.71□□□□□ -1.5
LSM5P40089 YBR144CYBR144C 315 nt5.71□□□□□ -1.5
LSM5P40089 IFA38YBR159W 1044 nt5.71□□□□□ -1.5
LSM5P40089 KEL1YHR158C 3495 nt5.71□□□□□ -1.5
LSM5P40089 MMR1YLR190W 1476 nt5.71□□□□□ -1.5
LSM5P40089 SIR2YDL042C 1689 nt5.7□□□□□ -1.5
LSM5P40089 RAM1YDL090C 1296 nt5.7□□□□□ -1.5
LSM5P40089 YGR127WYGR127W 939 nt5.7□□□□□ -1.5
LSM5P40089 YGR291CYGR291C 222 nt5.7□□□□□ -1.5
LSM5P40089 YNR040WYNR040W 771 nt5.7□□□□□ -1.5
LSM5P40089 YNR048WYNR048W 1182 nt5.7□□□□□ -1.5
LSM5P40089 HEM15YOR176W 1182 nt5.7□□□□□ -1.5
LSM5P40089 ARO7YPR060C 771 nt5.7□□□□□ -1.5
LSM5P40089 YBR298C-AYBR298C-A 222 nt5.7□□□□□ -1.5
LSM5P40089 YOL036WYOL036W 2286 nt5.7□□□□□ -1.5
LSM5P40089 APE1YKL103C 1545 nt5.69□□□□□ -1.5
LSM5P40089 KTR5YNL029C 1569 nt5.69□□□□□ -1.5
LSM5P40089 RPT1YKL145W 1404 nt5.69□□□□□ -1.5
LSM5P40089 snR82snR82 268 nt5.69□□□□□ -1.5
LSM5P40089 YDL172CYDL172C 480 nt5.69□□□□□ -1.5
LSM5P40089 SYF2YGR129W 648 nt5.69□□□□□ -1.5
LSM5P40089 SUP2tY(GUA)D 75 nt5.69□□□□□ -1.5
LSM5P40089 SUP11tY(GUA)F1 75 nt5.69□□□□□ -1.5
LSM5P40089 SUP6tY(GUA)F2 75 nt5.69□□□□□ -1.5
LSM5P40089 SUP7tY(GUA)J1 75 nt5.69□□□□□ -1.5
LSM5P40089 SUP4tY(GUA)J2 75 nt5.69□□□□□ -1.5
LSM5P40089 SUP5tY(GUA)M1 75 nt5.69□□□□□ -1.5
LSM5P40089 SUP8tY(GUA)M2 75 nt5.69□□□□□ -1.5
LSM5P40089 SUP3tY(GUA)O 75 nt5.69□□□□□ -1.5
LSM5P40089 YOL163WYOL163W 510 nt5.69□□□□□ -1.5
LSM5P40089 RPS9AYPL081W 594 nt5.69□□□□□ -1.5
LSM5P40089 STE12YHR084W 2067 nt5.69□□□□□ -1.5
LSM5P40089 RMD9YGL107C 1941 nt5.69□□□□□ -1.5
LSM5P40089 MNN5YJL186W 1761 nt5.69□□□□□ -1.5
LSM5P40089 VAN1YML115C 1608 nt5.69□□□□□ -1.5
LSM5P40089 ATR1YML116W 1629 nt5.69□□□□□ -1.5
LSM5P40089 MTF2YDL044C 1323 nt5.69□□□□□ -1.5
LSM5P40089 RPN5YDL147W 1338 nt5.69□□□□□ -1.5
LSM5P40089 PRP24YMR268C 1335 nt5.69□□□□□ -1.5
LSM5P40089 HAS1YMR290C 1518 nt5.69□□□□□ -1.5
LSM5P40089 YHL017WYHL017W 1599 nt5.68□□□□□ -1.5
LSM5P40089 GPB2YAL056W 2643 nt5.68□□□□□ -1.5
LSM5P40089 YDR109CYDR109C 2148 nt5.68□□□□□ -1.5
LSM5P40089 EFT2YDR385W 2529 nt5.68□□□□□ -1.5
LSM5P40089 EFT1YOR133W 2529 nt5.68□□□□□ -1.5
LSM5P40089 APE3YBR286W 1614 nt5.68□□□□□ -1.5
LSM5P40089 ASP1YDR321W 1146 nt5.68□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms