Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ZNRF2P2-203ENST00000454624 420 ntBASIC19.24■□□□□ 0.67
SNCAP37840 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNCAP37840 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.24■□□□□ 0.67
SNCAP37840 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.24■□□□□ 0.67
SNCAP37840 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
SNCAP37840 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNCAP37840 LINC01124-201ENST00000409786 2117 ntBASIC19.24■□□□□ 0.67
SNCAP37840 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNCAP37840 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNCAP37840 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNCAP37840 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNCAP37840 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.23■□□□□ 0.67
SNCAP37840 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNCAP37840 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNCAP37840 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNCAP37840 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNCAP37840 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SNCAP37840 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNCAP37840 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNCAP37840 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNCAP37840 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNCAP37840 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNCAP37840 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNCAP37840 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNCAP37840 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNCAP37840 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.21■□□□□ 0.67
SNCAP37840 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNCAP37840 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNCAP37840 AC126177.7-201ENST00000547904 679 ntBASIC19.21■□□□□ 0.67
SNCAP37840 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.21■□□□□ 0.67
SNCAP37840 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNCAP37840 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNCAP37840 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNCAP37840 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNCAP37840 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNCAP37840 DUSP8P5-201ENST00000422884 1815 ntBASIC19.21■□□□□ 0.67
SNCAP37840 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNCAP37840 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNCAP37840 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SNCAP37840 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNCAP37840 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.2■□□□□ 0.66
SNCAP37840 HLA-V-202ENST00000446817 847 ntBASIC19.2■□□□□ 0.66
SNCAP37840 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.2■□□□□ 0.66
SNCAP37840 AL359504.2-201ENST00000605506 1601 ntBASIC19.2■□□□□ 0.66
SNCAP37840 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNCAP37840 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SNCAP37840 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNCAP37840 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.19■□□□□ 0.66
SNCAP37840 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNCAP37840 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNCAP37840 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNCAP37840 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SNCAP37840 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.19■□□□□ 0.66
SNCAP37840 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNCAP37840 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.19■□□□□ 0.66
SNCAP37840 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNCAP37840 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
SNCAP37840 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNCAP37840 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNCAP37840 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNCAP37840 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNCAP37840 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SNCAP37840 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.18■□□□□ 0.66
SNCAP37840 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNCAP37840 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNCAP37840 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SNCAP37840 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.17■□□□□ 0.66
SNCAP37840 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNCAP37840 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SNCAP37840 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNCAP37840 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SNCAP37840 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
SNCAP37840 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNCAP37840 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNCAP37840 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNCAP37840 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNCAP37840 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.17■□□□□ 0.66
SNCAP37840 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNCAP37840 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SNCAP37840 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SNCAP37840 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNCAP37840 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNCAP37840 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.16■□□□□ 0.66
SNCAP37840 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNCAP37840 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNCAP37840 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNCAP37840 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNCAP37840 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNCAP37840 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNCAP37840 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNCAP37840 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SNCAP37840 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNCAP37840 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
SNCAP37840 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SNCAP37840 AC096887.2-201ENST00000623443 1957 ntBASIC19.15■□□□□ 0.66
SNCAP37840 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNCAP37840 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SNCAP37840 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.14■□□□□ 0.66
SNCAP37840 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNCAP37840 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms