Protein–RNA interactions for Protein: P34223

SHP1, UBX domain-containing protein 1, yeastyeast

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHP1P34223 GFA1YKL104C 2154 nt6.13□□□□□ -1.43
SHP1P34223 YER148W-AYER148W-A 579 nt6.13□□□□□ -1.43
SHP1P34223 tX(XXX)DtX(XXX)D 100 nt6.13□□□□□ -1.43
SHP1P34223 YLL059CYLL059C 507 nt6.13□□□□□ -1.43
SHP1P34223 PGA3YML125C 939 nt6.13□□□□□ -1.43
SHP1P34223 OST3YOR085W 1053 nt6.13□□□□□ -1.43
SHP1P34223 GDA1YEL042W 1557 nt6.13□□□□□ -1.43
SHP1P34223 RRP45YDR280W 918 nt6.12□□□□□ -1.43
SHP1P34223 MHR1YDR296W 681 nt6.12□□□□□ -1.43
SHP1P34223 YER186CYER186C 921 nt6.12□□□□□ -1.43
SHP1P34223 ORM1YGR038W 669 nt6.12□□□□□ -1.43
SHP1P34223 FET4YMR319C 1659 nt6.12□□□□□ -1.43
SHP1P34223 SAM4YPL273W 978 nt6.12□□□□□ -1.43
SHP1P34223 YPR123CYPR123C 435 nt6.12□□□□□ -1.43
SHP1P34223 HXT2YMR011W 1626 nt6.11□□□□□ -1.43
SHP1P34223 HSP78YDR258C 2436 nt6.11□□□□□ -1.43
SHP1P34223 VNX1YNL321W 2727 nt6.11□□□□□ -1.43
SHP1P34223 GAT1YFL021W 1533 nt6.1□□□□□ -1.43
SHP1P34223 YRF1-4YLR466W 4149 nt6.1□□□□□ -1.43
SHP1P34223 NDC1YML031W 1968 nt6.1□□□□□ -1.43
SHP1P34223 GET3YDL100C 1065 nt6.1□□□□□ -1.43
SHP1P34223 tR(ACG)JtR(ACG)J 73 nt6.1□□□□□ -1.43
SHP1P34223 YHR127WYHR127W 732 nt6.1□□□□□ -1.43
SHP1P34223 BBP1YPL255W 1158 nt6.1□□□□□ -1.43
SHP1P34223 MRS1YIR021W 1092 nt6.09□□□□□ -1.43
SHP1P34223 CIS3YJL158C 684 nt6.09□□□□□ -1.43
SHP1P34223 RPN7YPR108W 1290 nt6.09□□□□□ -1.43
SHP1P34223 SOG2YOR353C 2376 nt6.08□□□□□ -1.44
SHP1P34223 YOR342CYOR342C 960 nt6.08□□□□□ -1.44
SHP1P34223 UGO1YDR470C 1509 nt6.08□□□□□ -1.44
SHP1P34223 TRK2YKR050W 2670 nt6.07□□□□□ -1.44
SHP1P34223 TDH3YGR192C 999 nt6.07□□□□□ -1.44
SHP1P34223 ATP14YLR295C 375 nt6.07□□□□□ -1.44
SHP1P34223 VMA4YOR332W 702 nt6.07□□□□□ -1.44
SHP1P34223 CBC2YPL178W 627 nt6.07□□□□□ -1.44
SHP1P34223 GPA1YHR005C 1419 nt6.07□□□□□ -1.44
SHP1P34223 PHO8YDR481C 1701 nt6.06□□□□□ -1.44
SHP1P34223 YNR042WYNR042W 429 nt6.06□□□□□ -1.44
SHP1P34223 YNR048WYNR048W 1182 nt6.06□□□□□ -1.44
SHP1P34223 RPT1YKL145W 1404 nt6.06□□□□□ -1.44
SHP1P34223 YBR284WYBR284W 2394 nt6.06□□□□□ -1.44
SHP1P34223 GLN3YER040W 2193 nt6.06□□□□□ -1.44
SHP1P34223 SMF2YHR050W 1650 nt6.05□□□□□ -1.44
SHP1P34223 YHR145CYHR145C 357 nt6.05□□□□□ -1.44
SHP1P34223 ETR1YBR026C 1143 nt6.05□□□□□ -1.44
SHP1P34223 STL1YDR536W 1710 nt6.05□□□□□ -1.44
SHP1P34223 HIR1YBL008W 2523 nt6.03□□□□□ -1.44
SHP1P34223 TOS4YLR183C 1470 nt6.03□□□□□ -1.44
SHP1P34223 ALT1YLR089C 1779 nt6.03□□□□□ -1.44
SHP1P34223 YGL036WYGL036W 2730 nt6.03□□□□□ -1.44
SHP1P34223 POP1YNL221C 2628 nt6.02□□□□□ -1.45
SHP1P34223 YHR045WYHR045W 1683 nt6.02□□□□□ -1.45
SHP1P34223 GFD1YMR255W 567 nt6.02□□□□□ -1.45
SHP1P34223 MTC1YJL123C 1437 nt6.01□□□□□ -1.45
SHP1P34223 SKI2YLR398C 3864 nt6.01□□□□□ -1.45
SHP1P34223 SLX5YDL013W 1860 nt6.01□□□□□ -1.45
SHP1P34223 ATP4YPL078C 735 nt6.01□□□□□ -1.45
SHP1P34223 RBD2YPL246C 789 nt6.01□□□□□ -1.45
SHP1P34223 YEH1YLL012W 1722 nt6.01□□□□□ -1.45
SHP1P34223 HXK2YGL253W 1461 nt6.01□□□□□ -1.45
SHP1P34223 ISC1YER019W 1434 nt6□□□□□ -1.45
SHP1P34223 QDR3YBR043C 2070 nt6□□□□□ -1.45
SHP1P34223 YDR401WYDR401W 564 nt6□□□□□ -1.45
SHP1P34223 SNZ3YFL059W 897 nt6□□□□□ -1.45
SHP1P34223 SKG1YKR100C 1068 nt6□□□□□ -1.45
SHP1P34223 YMR010WYMR010W 1218 nt6□□□□□ -1.45
SHP1P34223 SNZ2YNL333W 897 nt6□□□□□ -1.45
SHP1P34223 ATG23YLR431C 1362 nt6□□□□□ -1.45
SHP1P34223 AIM3YBR108W 2844 nt6□□□□□ -1.45
SHP1P34223 ACF2YLR144C 2340 nt5.99□□□□□ -1.45
SHP1P34223 ICE2YIL090W 1476 nt5.99□□□□□ -1.45
SHP1P34223 ENP1YBR247C 1452 nt5.99□□□□□ -1.45
SHP1P34223 YCR075W-AYCR075W-A 228 nt5.99□□□□□ -1.45
SHP1P34223 YGR127WYGR127W 939 nt5.99□□□□□ -1.45
SHP1P34223 YJL068CYJL068C 900 nt5.99□□□□□ -1.45
SHP1P34223 SLD7YOR060C 774 nt5.99□□□□□ -1.45
SHP1P34223 AVT4YNL101W 2142 nt5.99□□□□□ -1.45
SHP1P34223 DPH2YKL191W 1605 nt5.99□□□□□ -1.45
SHP1P34223 POM33YLL023C 840 nt5.98□□□□□ -1.45
SHP1P34223 RPS15YOL040C 429 nt5.98□□□□□ -1.45
SHP1P34223 HST2YPL015C 1074 nt5.98□□□□□ -1.45
SHP1P34223 SPS22YCL048W 1392 nt5.97□□□□□ -1.45
SHP1P34223 REV7YIL139C 738 nt5.97□□□□□ -1.45
SHP1P34223 SER1YOR184W 1188 nt5.97□□□□□ -1.45
SHP1P34223 UBC4YBR082C 447 nt5.97□□□□□ -1.45
SHP1P34223 UTP7YER082C 1665 nt5.97□□□□□ -1.45
SHP1P34223 TAX4YJL083W 1815 nt5.97□□□□□ -1.45
SHP1P34223 VPS4YPR173C 1314 nt5.97□□□□□ -1.45
SHP1P34223 MID1YNL291C 1647 nt5.96□□□□□ -1.45
SHP1P34223 ALT2YDR111C 1524 nt5.96□□□□□ -1.46
SHP1P34223 THI21YPL258C 1656 nt5.96□□□□□ -1.46
SHP1P34223 YDR134CYDR134C 411 nt5.96□□□□□ -1.46
SHP1P34223 RER2YBR002C 861 nt5.96□□□□□ -1.46
SHP1P34223 TEF1YPR080W 1377 nt5.95□□□□□ -1.46
SHP1P34223 TEF2YBR118W 1377 nt5.95□□□□□ -1.46
SHP1P34223 GEP3YOR205C 1671 nt5.95□□□□□ -1.46
SHP1P34223 LAG2YOL025W 1983 nt5.95□□□□□ -1.46
SHP1P34223 PIF1YML061C 2580 nt5.95□□□□□ -1.46
SHP1P34223 SUA5YGL169W 1281 nt5.95□□□□□ -1.46
SHP1P34223 IMA5YJL216C 1746 nt5.95□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 10.5 ms