Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF728P0DKX0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF728P0DKX0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF728P0DKX0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF728P0DKX0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF728P0DKX0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF728P0DKX0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF728P0DKX0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF728P0DKX0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ZNF728P0DKX0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF728P0DKX0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF728P0DKX0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF728P0DKX0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF728P0DKX0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF728P0DKX0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF728P0DKX0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.94■□□□□ 0.78
ZNF728P0DKX0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.94■□□□□ 0.78
ZNF728P0DKX0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF728P0DKX0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.94■□□□□ 0.78
ZNF728P0DKX0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF728P0DKX0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF728P0DKX0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF728P0DKX0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
ZNF728P0DKX0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.93■□□□□ 0.78
ZNF728P0DKX0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
ZNF728P0DKX0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF728P0DKX0 AC026202.3-201ENST00000600805 1127 ntBASIC19.93■□□□□ 0.78
ZNF728P0DKX0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF728P0DKX0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF728P0DKX0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.93■□□□□ 0.78
ZNF728P0DKX0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
ZNF728P0DKX0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF728P0DKX0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF728P0DKX0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.92■□□□□ 0.78
ZNF728P0DKX0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF728P0DKX0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNF728P0DKX0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF728P0DKX0 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.92■□□□□ 0.78
ZNF728P0DKX0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF728P0DKX0 RAP2CP1-202ENST00000605179 643 ntBASIC19.92■□□□□ 0.78
ZNF728P0DKX0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF728P0DKX0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF728P0DKX0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF728P0DKX0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF728P0DKX0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF728P0DKX0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF728P0DKX0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ZNF728P0DKX0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF728P0DKX0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ZNF728P0DKX0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF728P0DKX0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.91■□□□□ 0.78
ZNF728P0DKX0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF728P0DKX0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF728P0DKX0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF728P0DKX0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF728P0DKX0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF728P0DKX0 AC133552.2-201ENST00000619106 1032 ntBASIC19.9■□□□□ 0.78
ZNF728P0DKX0 AC009831.1-201ENST00000580420 1582 ntBASIC19.9■□□□□ 0.78
ZNF728P0DKX0 AP003733.4-201ENST00000623785 1697 ntBASIC19.9■□□□□ 0.78
ZNF728P0DKX0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF728P0DKX0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF728P0DKX0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ZNF728P0DKX0 LINC01124-201ENST00000409786 2117 ntBASIC19.9■□□□□ 0.78
ZNF728P0DKX0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF728P0DKX0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
ZNF728P0DKX0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF728P0DKX0 ABHD17AP5-201ENST00000580133 923 ntBASIC19.89■□□□□ 0.77
ZNF728P0DKX0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ZNF728P0DKX0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF728P0DKX0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF728P0DKX0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF728P0DKX0 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.88■□□□□ 0.77
ZNF728P0DKX0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF728P0DKX0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF728P0DKX0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.88■□□□□ 0.77
ZNF728P0DKX0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ZNF728P0DKX0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.88■□□□□ 0.77
ZNF728P0DKX0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF728P0DKX0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF728P0DKX0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF728P0DKX0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF728P0DKX0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF728P0DKX0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.87■□□□□ 0.77
ZNF728P0DKX0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF728P0DKX0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF728P0DKX0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF728P0DKX0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF728P0DKX0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF728P0DKX0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF728P0DKX0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF728P0DKX0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.87■□□□□ 0.77
ZNF728P0DKX0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF728P0DKX0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF728P0DKX0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF728P0DKX0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ZNF728P0DKX0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF728P0DKX0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF728P0DKX0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF728P0DKX0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF728P0DKX0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms