Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 YEA6YEL006W 1008 nt5.32□□□□□ -1.56
RPL40AP0CH08 HSP150YJL159W 1242 nt5.32□□□□□ -1.56
RPL40AP0CH08 IFA38YBR159W 1044 nt5.32□□□□□ -1.56
RPL40AP0CH08 PRP31YGR091W 1485 nt5.32□□□□□ -1.56
RPL40AP0CH08 GLE1YDL207W 1617 nt5.31□□□□□ -1.56
RPL40AP0CH08 YCK1YHR135C 1617 nt5.31□□□□□ -1.56
RPL40AP0CH08 AMD1YML035C 2433 nt5.31□□□□□ -1.56
RPL40AP0CH08 TMT1YER175C 900 nt5.31□□□□□ -1.56
RPL40AP0CH08 YHR070C-AYHR070C-A 411 nt5.31□□□□□ -1.56
RPL40AP0CH08 YMR119W-AYMR119W-A 375 nt5.31□□□□□ -1.56
RPL40AP0CH08 HDA1YNL021W 2121 nt5.31□□□□□ -1.56
RPL40AP0CH08 VMA4YOR332W 702 nt5.31□□□□□ -1.56
RPL40AP0CH08 CSG2YBR036C 1233 nt5.31□□□□□ -1.56
RPL40AP0CH08 DAL7YIR031C 1665 nt5.31□□□□□ -1.56
RPL40AP0CH08 YOL097W-AYOL097W-A 186 nt5.3□□□□□ -1.56
RPL40AP0CH08 DCS2YOR173W 1062 nt5.3□□□□□ -1.56
RPL40AP0CH08 ARN1YHL040C 1884 nt5.3□□□□□ -1.56
RPL40AP0CH08 IES1YFL013C 2079 nt5.3□□□□□ -1.56
RPL40AP0CH08 ATG4YNL223W 1485 nt5.29□□□□□ -1.56
RPL40AP0CH08 TAF10YDR167W 621 nt5.29□□□□□ -1.56
RPL40AP0CH08 LCP5YER127W 1074 nt5.29□□□□□ -1.56
RPL40AP0CH08 RHO4YKR055W 876 nt5.29□□□□□ -1.56
RPL40AP0CH08 CCS1YMR038C 750 nt5.29□□□□□ -1.56
RPL40AP0CH08 YHM2YMR241W 945 nt5.29□□□□□ -1.56
RPL40AP0CH08 MVD1YNR043W 1191 nt5.29□□□□□ -1.56
RPL40AP0CH08 PIN2YOR104W 849 nt5.29□□□□□ -1.56
RPL40AP0CH08 ETR1YBR026C 1143 nt5.29□□□□□ -1.56
RPL40AP0CH08 CLB1YGR108W 1416 nt5.29□□□□□ -1.56
RPL40AP0CH08 MCM6YGL201C 3054 nt5.28□□□□□ -1.56
RPL40AP0CH08 TIF5YPR041W 1218 nt5.28□□□□□ -1.56
RPL40AP0CH08 NHP6AYPR052C 282 nt5.28□□□□□ -1.56
RPL40AP0CH08 FRS2YFL022C 1512 nt5.28□□□□□ -1.56
RPL40AP0CH08 YEN1YER041W 2280 nt5.27□□□□□ -1.57
RPL40AP0CH08 COX26YDR119W-A 201 nt5.27□□□□□ -1.57
RPL40AP0CH08 YIL171W-AYIL171W-A 453 nt5.27□□□□□ -1.57
RPL40AP0CH08 YJL220WYJL220W 453 nt5.27□□□□□ -1.57
RPL40AP0CH08 PYC2YBR218C 3543 nt5.26□□□□□ -1.57
RPL40AP0CH08 CAB4YGR277C 918 nt5.26□□□□□ -1.57
RPL40AP0CH08 BCY1YIL033C 1251 nt5.26□□□□□ -1.57
RPL40AP0CH08 YLL059CYLL059C 507 nt5.26□□□□□ -1.57
RPL40AP0CH08 RPS15YOL040C 429 nt5.26□□□□□ -1.57
RPL40AP0CH08 RPT3YDR394W 1287 nt5.25□□□□□ -1.57
RPL40AP0CH08 SUP19tS(UGA)E 82 nt5.25□□□□□ -1.57
RPL40AP0CH08 SUP17tS(UGA)I 82 nt5.25□□□□□ -1.57
RPL40AP0CH08 SUP16tS(UGA)P 82 nt5.25□□□□□ -1.57
RPL40AP0CH08 COS9YKL219W 1224 nt5.25□□□□□ -1.57
RPL40AP0CH08 YKR041WYKR041W 753 nt5.25□□□□□ -1.57
RPL40AP0CH08 POM33YLL023C 840 nt5.25□□□□□ -1.57
RPL40AP0CH08 SER1YOR184W 1188 nt5.25□□□□□ -1.57
RPL40AP0CH08 CBC2YPL178W 627 nt5.25□□□□□ -1.57
RPL40AP0CH08 YBR124WYBR124W 360 nt5.25□□□□□ -1.57
RPL40AP0CH08 SLX5YDL013W 1860 nt5.25□□□□□ -1.57
RPL40AP0CH08 YTP1YNL237W 1380 nt5.25□□□□□ -1.57
RPL40AP0CH08 ALT2YDR111C 1524 nt5.24□□□□□ -1.57
RPL40AP0CH08 TNA1YGR260W 1605 nt5.24□□□□□ -1.57
RPL40AP0CH08 GCS1YDL226C 1059 nt5.24□□□□□ -1.57
RPL40AP0CH08 MGR2YPL098C 342 nt5.24□□□□□ -1.57
RPL40AP0CH08 VRP1YLR337C 2454 nt5.23□□□□□ -1.57
RPL40AP0CH08 LSG1YGL099W 1923 nt5.23□□□□□ -1.57
RPL40AP0CH08 PRE7YBL041W 726 nt5.23□□□□□ -1.57
RPL40AP0CH08 MKK2YPL140C 1521 nt5.23□□□□□ -1.57
RPL40AP0CH08 HXT5YHR096C 1779 nt5.22□□□□□ -1.57
RPL40AP0CH08 TUB2YFL037W 1374 nt5.22□□□□□ -1.57
RPL40AP0CH08 YOL131WYOL131W 327 nt5.22□□□□□ -1.57
RPL40AP0CH08 SFB3YHR098C 2790 nt5.22□□□□□ -1.57
RPL40AP0CH08 APE3YBR286W 1614 nt5.22□□□□□ -1.57
RPL40AP0CH08 GAT1YFL021W 1533 nt5.22□□□□□ -1.57
RPL40AP0CH08 HIR1YBL008W 2523 nt5.21□□□□□ -1.58
RPL40AP0CH08 PHO8YDR481C 1701 nt5.21□□□□□ -1.58
RPL40AP0CH08 tR(ACG)DtR(ACG)D 73 nt5.21□□□□□ -1.58
RPL40AP0CH08 tR(ACG)EtR(ACG)E 73 nt5.21□□□□□ -1.58
RPL40AP0CH08 tR(ACG)KtR(ACG)K 73 nt5.21□□□□□ -1.58
RPL40AP0CH08 tR(ACG)LtR(ACG)L 73 nt5.21□□□□□ -1.58
RPL40AP0CH08 tR(ACG)OtR(ACG)O 73 nt5.21□□□□□ -1.58
RPL40AP0CH08 SUP2tY(GUA)D 75 nt5.21□□□□□ -1.58
RPL40AP0CH08 SUP11tY(GUA)F1 75 nt5.21□□□□□ -1.58
RPL40AP0CH08 SUP6tY(GUA)F2 75 nt5.21□□□□□ -1.58
RPL40AP0CH08 SUP7tY(GUA)J1 75 nt5.21□□□□□ -1.58
RPL40AP0CH08 SUP4tY(GUA)J2 75 nt5.21□□□□□ -1.58
RPL40AP0CH08 SUP5tY(GUA)M1 75 nt5.21□□□□□ -1.58
RPL40AP0CH08 SUP8tY(GUA)M2 75 nt5.21□□□□□ -1.58
RPL40AP0CH08 SUP3tY(GUA)O 75 nt5.21□□□□□ -1.58
RPL40AP0CH08 NPA3YJR072C 1158 nt5.21□□□□□ -1.58
RPL40AP0CH08 DPH2YKL191W 1605 nt5.21□□□□□ -1.58
RPL40AP0CH08 GUD1YDL238C 1470 nt5.2□□□□□ -1.58
RPL40AP0CH08 PRP46YPL151C 1356 nt5.2□□□□□ -1.58
RPL40AP0CH08 CHO1YER026C 831 nt5.2□□□□□ -1.58
RPL40AP0CH08 tN(GUU)CtN(GUU)C 74 nt5.2□□□□□ -1.58
RPL40AP0CH08 tN(GUU)FtN(GUU)F 74 nt5.2□□□□□ -1.58
RPL40AP0CH08 tN(GUU)GtN(GUU)G 74 nt5.2□□□□□ -1.58
RPL40AP0CH08 tN(GUU)KtN(GUU)K 74 nt5.2□□□□□ -1.58
RPL40AP0CH08 tN(GUU)LtN(GUU)L 74 nt5.2□□□□□ -1.58
RPL40AP0CH08 tN(GUU)N1tN(GUU)N1 74 nt5.2□□□□□ -1.58
RPL40AP0CH08 tN(GUU)N2tN(GUU)N2 74 nt5.2□□□□□ -1.58
RPL40AP0CH08 tN(GUU)O1tN(GUU)O1 74 nt5.2□□□□□ -1.58
RPL40AP0CH08 tN(GUU)O2tN(GUU)O2 74 nt5.2□□□□□ -1.58
RPL40AP0CH08 tN(GUU)PtN(GUU)P 74 nt5.2□□□□□ -1.58
RPL40AP0CH08 APS3YJL024C 585 nt5.2□□□□□ -1.58
RPL40AP0CH08 BUD28YLR062C 378 nt5.2□□□□□ -1.58
RPL40AP0CH08 ELC1YPL046C 300 nt5.2□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 32.4 ms