Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
FREM3P0C091 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
FREM3P0C091 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FREM3P0C091 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
FREM3P0C091 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
FREM3P0C091 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.52■■□□□ 1.03
FREM3P0C091 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
FREM3P0C091 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.52■■□□□ 1.03
FREM3P0C091 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FREM3P0C091 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FREM3P0C091 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FREM3P0C091 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
FREM3P0C091 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FREM3P0C091 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.5■■□□□ 1.03
FREM3P0C091 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
FREM3P0C091 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FREM3P0C091 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
FREM3P0C091 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.5■■□□□ 1.03
FREM3P0C091 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
FREM3P0C091 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
FREM3P0C091 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
FREM3P0C091 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FREM3P0C091 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FREM3P0C091 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FREM3P0C091 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.49■■□□□ 1.03
FREM3P0C091 MIR4281-201ENST00000580852 62 ntBASIC21.49■■□□□ 1.03
FREM3P0C091 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FREM3P0C091 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FREM3P0C091 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
FREM3P0C091 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FREM3P0C091 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.49■■□□□ 1.03
FREM3P0C091 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FREM3P0C091 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FREM3P0C091 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
FREM3P0C091 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FREM3P0C091 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.48■■□□□ 1.03
FREM3P0C091 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FREM3P0C091 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FREM3P0C091 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
FREM3P0C091 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FREM3P0C091 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FREM3P0C091 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FREM3P0C091 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
FREM3P0C091 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.47■■□□□ 1.03
FREM3P0C091 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.47■■□□□ 1.03
FREM3P0C091 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FREM3P0C091 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.47■■□□□ 1.03
FREM3P0C091 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.47■■□□□ 1.03
FREM3P0C091 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FREM3P0C091 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
FREM3P0C091 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
FREM3P0C091 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FREM3P0C091 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.47■■□□□ 1.03
FREM3P0C091 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FREM3P0C091 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FREM3P0C091 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.46■■□□□ 1.03
FREM3P0C091 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
FREM3P0C091 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FREM3P0C091 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.46■■□□□ 1.03
FREM3P0C091 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
FREM3P0C091 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.46■■□□□ 1.03
FREM3P0C091 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
FREM3P0C091 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FREM3P0C091 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.45■■□□□ 1.02
FREM3P0C091 GUSBP5-201ENST00000418136 578 ntBASIC21.45■■□□□ 1.02
FREM3P0C091 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FREM3P0C091 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
FREM3P0C091 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
FREM3P0C091 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FREM3P0C091 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
FREM3P0C091 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FREM3P0C091 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
FREM3P0C091 AC135731.1-201ENST00000569415 2548 ntBASIC21.44■■□□□ 1.02
FREM3P0C091 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.43■■□□□ 1.02
FREM3P0C091 Z92544.1-202ENST00000571933 1220 ntBASIC21.43■■□□□ 1.02
FREM3P0C091 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
FREM3P0C091 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FREM3P0C091 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FREM3P0C091 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FREM3P0C091 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
FREM3P0C091 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FREM3P0C091 KRT18P24-201ENST00000344739 1156 ntBASIC21.42■■□□□ 1.02
FREM3P0C091 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FREM3P0C091 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.42■■□□□ 1.02
FREM3P0C091 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FREM3P0C091 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.42■■□□□ 1.02
FREM3P0C091 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
FREM3P0C091 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.42■■□□□ 1.02
FREM3P0C091 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
FREM3P0C091 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
FREM3P0C091 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.41■■□□□ 1.02
FREM3P0C091 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FREM3P0C091 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
FREM3P0C091 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FREM3P0C091 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FREM3P0C091 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FREM3P0C091 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.41■■□□□ 1.02
FREM3P0C091 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FREM3P0C091 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FREM3P0C091 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms