Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
PGK1P00558 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
PGK1P00558 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.63■■□□□ 1.85
PGK1P00558 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
PGK1P00558 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.61■■□□□ 1.85
PGK1P00558 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
PGK1P00558 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PGK1P00558 AL512631.2-201ENST00000604634 923 ntBASIC26.61■■□□□ 1.85
PGK1P00558 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PGK1P00558 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.6■■□□□ 1.85
PGK1P00558 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PGK1P00558 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PGK1P00558 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PGK1P00558 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.59■■□□□ 1.85
PGK1P00558 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PGK1P00558 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PGK1P00558 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
PGK1P00558 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PGK1P00558 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
PGK1P00558 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.58■■□□□ 1.85
PGK1P00558 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PGK1P00558 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PGK1P00558 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PGK1P00558 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PGK1P00558 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
PGK1P00558 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PGK1P00558 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.57■■□□□ 1.84
PGK1P00558 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.57■■□□□ 1.84
PGK1P00558 AF131216.4-201ENST00000638924 1588 ntBASIC26.57■■□□□ 1.84
PGK1P00558 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.57■■□□□ 1.84
PGK1P00558 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
PGK1P00558 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.56■■□□□ 1.84
PGK1P00558 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.56■■□□□ 1.84
PGK1P00558 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.56■■□□□ 1.84
PGK1P00558 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PGK1P00558 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PGK1P00558 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.55■■□□□ 1.84
PGK1P00558 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PGK1P00558 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.55■■□□□ 1.84
PGK1P00558 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.54■■□□□ 1.84
PGK1P00558 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PGK1P00558 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PGK1P00558 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PGK1P00558 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.54■■□□□ 1.84
PGK1P00558 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PGK1P00558 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PGK1P00558 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.53■■□□□ 1.84
PGK1P00558 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PGK1P00558 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PGK1P00558 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.53■■□□□ 1.84
PGK1P00558 AC133561.4-201ENST00000566112 224 ntBASIC26.53■■□□□ 1.84
PGK1P00558 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
PGK1P00558 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PGK1P00558 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PGK1P00558 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
PGK1P00558 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.52■■□□□ 1.84
PGK1P00558 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.52■■□□□ 1.84
PGK1P00558 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
PGK1P00558 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PGK1P00558 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.51■■□□□ 1.83
PGK1P00558 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PGK1P00558 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PGK1P00558 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
PGK1P00558 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PGK1P00558 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PGK1P00558 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.5■■□□□ 1.83
PGK1P00558 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PGK1P00558 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
PGK1P00558 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PGK1P00558 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PGK1P00558 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PGK1P00558 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.49■■□□□ 1.83
PGK1P00558 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.49■■□□□ 1.83
PGK1P00558 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.48■■□□□ 1.83
PGK1P00558 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PGK1P00558 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
PGK1P00558 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
PGK1P00558 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PGK1P00558 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.47■■□□□ 1.83
PGK1P00558 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PGK1P00558 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
PGK1P00558 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PGK1P00558 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PGK1P00558 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.46■■□□□ 1.83
PGK1P00558 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
PGK1P00558 PBX2P1-201ENST00000493219 1291 ntBASIC26.46■■□□□ 1.83
PGK1P00558 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.46■■□□□ 1.83
PGK1P00558 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.46■■□□□ 1.83
PGK1P00558 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PGK1P00558 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PGK1P00558 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.45■■□□□ 1.82
PGK1P00558 ZNRF2P3-201ENST00000424200 374 ntBASIC26.45■■□□□ 1.82
PGK1P00558 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PGK1P00558 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PGK1P00558 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PGK1P00558 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PGK1P00558 FOXO3B-201ENST00000395675 1928 ntBASIC26.44■■□□□ 1.82
PGK1P00558 AC106739.1-201ENST00000617035 715 ntBASIC26.44■■□□□ 1.82
PGK1P00558 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
PGK1P00558 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms