Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
PGK1P00558 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
PGK1P00558 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.63■■□□□ 1.85
PGK1P00558 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
PGK1P00558 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.61■■□□□ 1.85
PGK1P00558 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
PGK1P00558 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PGK1P00558 AL512631.2-201ENST00000604634 923 ntBASIC26.61■■□□□ 1.85
PGK1P00558 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PGK1P00558 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.6■■□□□ 1.85
PGK1P00558 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PGK1P00558 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PGK1P00558 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PGK1P00558 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.59■■□□□ 1.85
PGK1P00558 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PGK1P00558 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PGK1P00558 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
PGK1P00558 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PGK1P00558 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
PGK1P00558 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.58■■□□□ 1.85
PGK1P00558 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PGK1P00558 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PGK1P00558 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PGK1P00558 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PGK1P00558 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
PGK1P00558 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PGK1P00558 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.57■■□□□ 1.84
PGK1P00558 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.57■■□□□ 1.84
PGK1P00558 AF131216.4-201ENST00000638924 1588 ntBASIC26.57■■□□□ 1.84
PGK1P00558 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.57■■□□□ 1.84
PGK1P00558 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
PGK1P00558 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.56■■□□□ 1.84
PGK1P00558 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.56■■□□□ 1.84
PGK1P00558 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.56■■□□□ 1.84
PGK1P00558 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PGK1P00558 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PGK1P00558 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.55■■□□□ 1.84
PGK1P00558 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PGK1P00558 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.55■■□□□ 1.84
PGK1P00558 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.54■■□□□ 1.84
PGK1P00558 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PGK1P00558 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PGK1P00558 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PGK1P00558 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.54■■□□□ 1.84
PGK1P00558 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PGK1P00558 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PGK1P00558 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.53■■□□□ 1.84
PGK1P00558 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PGK1P00558 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PGK1P00558 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.53■■□□□ 1.84
PGK1P00558 AC133561.4-201ENST00000566112 224 ntBASIC26.53■■□□□ 1.84
PGK1P00558 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
PGK1P00558 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PGK1P00558 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PGK1P00558 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
PGK1P00558 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.52■■□□□ 1.84
PGK1P00558 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.52■■□□□ 1.84
PGK1P00558 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
PGK1P00558 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PGK1P00558 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.51■■□□□ 1.83
PGK1P00558 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PGK1P00558 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PGK1P00558 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
PGK1P00558 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PGK1P00558 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PGK1P00558 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.5■■□□□ 1.83
PGK1P00558 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PGK1P00558 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
PGK1P00558 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PGK1P00558 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PGK1P00558 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PGK1P00558 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.49■■□□□ 1.83
PGK1P00558 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.49■■□□□ 1.83
PGK1P00558 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.48■■□□□ 1.83
PGK1P00558 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PGK1P00558 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
PGK1P00558 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
PGK1P00558 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PGK1P00558 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.47■■□□□ 1.83
PGK1P00558 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PGK1P00558 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
PGK1P00558 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PGK1P00558 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PGK1P00558 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.46■■□□□ 1.83
PGK1P00558 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
PGK1P00558 PBX2P1-201ENST00000493219 1291 ntBASIC26.46■■□□□ 1.83
PGK1P00558 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.46■■□□□ 1.83
PGK1P00558 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.46■■□□□ 1.83
PGK1P00558 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PGK1P00558 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PGK1P00558 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.45■■□□□ 1.82
PGK1P00558 ZNRF2P3-201ENST00000424200 374 ntBASIC26.45■■□□□ 1.82
PGK1P00558 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PGK1P00558 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PGK1P00558 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PGK1P00558 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PGK1P00558 FOXO3B-201ENST00000395675 1928 ntBASIC26.44■■□□□ 1.82
PGK1P00558 AC106739.1-201ENST00000617035 715 ntBASIC26.44■■□□□ 1.82
PGK1P00558 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
PGK1P00558 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms