Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF253O75346 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.2■□□□□ 0.5
ZNF253O75346 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.2■□□□□ 0.5
ZNF253O75346 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.2■□□□□ 0.5
ZNF253O75346 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF253O75346 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF253O75346 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ZNF253O75346 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF253O75346 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.19■□□□□ 0.5
ZNF253O75346 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNF253O75346 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF253O75346 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF253O75346 PKD1P6-201ENST00000343738 4769 ntBASIC18.19■□□□□ 0.5
ZNF253O75346 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF253O75346 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNF253O75346 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ZNF253O75346 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF253O75346 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF253O75346 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF253O75346 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF253O75346 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF253O75346 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNF253O75346 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF253O75346 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNF253O75346 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF253O75346 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ZNF253O75346 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
ZNF253O75346 AP003733.4-201ENST00000623785 1697 ntBASIC18.18■□□□□ 0.5
ZNF253O75346 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF253O75346 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF253O75346 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF253O75346 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF253O75346 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ZNF253O75346 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.17■□□□□ 0.5
ZNF253O75346 ZNRF2P2-203ENST00000454624 420 ntBASIC18.17■□□□□ 0.5
ZNF253O75346 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF253O75346 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.17■□□□□ 0.5
ZNF253O75346 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF253O75346 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF253O75346 AC097639.1-201ENST00000565519 1891 ntBASIC18.17■□□□□ 0.5
ZNF253O75346 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF253O75346 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF253O75346 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF253O75346 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF253O75346 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF253O75346 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF253O75346 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF253O75346 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF253O75346 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF253O75346 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF253O75346 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF253O75346 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF253O75346 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.16■□□□□ 0.5
ZNF253O75346 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ZNF253O75346 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.15■□□□□ 0.5
ZNF253O75346 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ZNF253O75346 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF253O75346 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF253O75346 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF253O75346 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF253O75346 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF253O75346 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF253O75346 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF253O75346 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.14■□□□□ 0.5
ZNF253O75346 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ZNF253O75346 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF253O75346 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF253O75346 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF253O75346 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF253O75346 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ZNF253O75346 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.14■□□□□ 0.49
ZNF253O75346 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF253O75346 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ZNF253O75346 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF253O75346 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF253O75346 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.13■□□□□ 0.49
ZNF253O75346 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF253O75346 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ZNF253O75346 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF253O75346 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF253O75346 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.13■□□□□ 0.49
ZNF253O75346 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF253O75346 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF253O75346 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF253O75346 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF253O75346 CR559946.2-201ENST00000623684 991 ntBASIC18.12■□□□□ 0.49
ZNF253O75346 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ZNF253O75346 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF253O75346 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF253O75346 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF253O75346 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF253O75346 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF253O75346 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF253O75346 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF253O75346 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF253O75346 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF253O75346 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF253O75346 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF253O75346 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.11■□□□□ 0.49
ZNF253O75346 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms