Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.87■■□□□ 1.73
TSPAN1O60635 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TSPAN1O60635 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.86■■□□□ 1.73
TSPAN1O60635 MIR4281-201ENST00000580852 62 ntBASIC25.86■■□□□ 1.73
TSPAN1O60635 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.86■■□□□ 1.73
TSPAN1O60635 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.86■■□□□ 1.73
TSPAN1O60635 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
TSPAN1O60635 BX664725.1-201ENST00000438252 379 ntBASIC25.85■■□□□ 1.73
TSPAN1O60635 AC011551.1-201ENST00000614101 683 ntBASIC25.85■■□□□ 1.73
TSPAN1O60635 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
TSPAN1O60635 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
TSPAN1O60635 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
TSPAN1O60635 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TSPAN1O60635 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.84■■□□□ 1.73
TSPAN1O60635 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.84■■□□□ 1.73
TSPAN1O60635 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.84■■□□□ 1.73
TSPAN1O60635 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.84■■□□□ 1.73
TSPAN1O60635 AC137630.3-201ENST00000607245 391 ntBASIC25.84■■□□□ 1.73
TSPAN1O60635 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TSPAN1O60635 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.83■■□□□ 1.73
TSPAN1O60635 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.83■■□□□ 1.73
TSPAN1O60635 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TSPAN1O60635 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.83■■□□□ 1.73
TSPAN1O60635 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.83■■□□□ 1.73
TSPAN1O60635 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
TSPAN1O60635 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TSPAN1O60635 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TSPAN1O60635 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.82■■□□□ 1.72
TSPAN1O60635 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TSPAN1O60635 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.82■■□□□ 1.72
TSPAN1O60635 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.82■■□□□ 1.72
TSPAN1O60635 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TSPAN1O60635 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TSPAN1O60635 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TSPAN1O60635 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
TSPAN1O60635 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.81■■□□□ 1.72
TSPAN1O60635 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.8■■□□□ 1.72
TSPAN1O60635 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.8■■□□□ 1.72
TSPAN1O60635 KRT125P-201ENST00000546827 989 ntBASIC25.8■■□□□ 1.72
TSPAN1O60635 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
TSPAN1O60635 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.8■■□□□ 1.72
TSPAN1O60635 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.8■■□□□ 1.72
TSPAN1O60635 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TSPAN1O60635 DUSP8P4-201ENST00000399538 1761 ntBASIC25.79■■□□□ 1.72
TSPAN1O60635 AC091060.1-201ENST00000623524 1766 ntBASIC25.79■■□□□ 1.72
TSPAN1O60635 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
TSPAN1O60635 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TSPAN1O60635 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
TSPAN1O60635 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.79■■□□□ 1.72
TSPAN1O60635 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.79■■□□□ 1.72
TSPAN1O60635 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.79■■□□□ 1.72
TSPAN1O60635 MIR4787-201ENST00000607364 84 ntBASIC25.79■■□□□ 1.72
TSPAN1O60635 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
TSPAN1O60635 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TSPAN1O60635 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TSPAN1O60635 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
TSPAN1O60635 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TSPAN1O60635 AC021242.3-201ENST00000607598 1377 ntBASIC25.78■■□□□ 1.72
TSPAN1O60635 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.78■■□□□ 1.72
TSPAN1O60635 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
TSPAN1O60635 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TSPAN1O60635 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.77■■□□□ 1.72
TSPAN1O60635 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.77■■□□□ 1.72
TSPAN1O60635 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TSPAN1O60635 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.76■■□□□ 1.71
TSPAN1O60635 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TSPAN1O60635 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.76■■□□□ 1.71
TSPAN1O60635 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.75■■□□□ 1.71
TSPAN1O60635 AL356441.2-201ENST00000443009 864 ntBASIC25.75■■□□□ 1.71
TSPAN1O60635 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
TSPAN1O60635 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TSPAN1O60635 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TSPAN1O60635 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TSPAN1O60635 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TSPAN1O60635 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
TSPAN1O60635 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.74■■□□□ 1.71
TSPAN1O60635 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.74■■□□□ 1.71
TSPAN1O60635 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
TSPAN1O60635 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.74■■□□□ 1.71
TSPAN1O60635 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TSPAN1O60635 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TSPAN1O60635 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
TSPAN1O60635 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
TSPAN1O60635 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
TSPAN1O60635 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.73■■□□□ 1.71
TSPAN1O60635 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.73■■□□□ 1.71
TSPAN1O60635 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
TSPAN1O60635 AC145676.1-201ENST00000514988 2004 ntBASIC25.72■■□□□ 1.71
TSPAN1O60635 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TSPAN1O60635 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.72■■□□□ 1.71
TSPAN1O60635 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
TSPAN1O60635 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
TSPAN1O60635 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.72■■□□□ 1.71
TSPAN1O60635 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.72■■□□□ 1.71
TSPAN1O60635 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TSPAN1O60635 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
TSPAN1O60635 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TSPAN1O60635 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.71■■□□□ 1.71
TSPAN1O60635 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TSPAN1O60635 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms