Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SSX4O60224 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.18■□□□□ 0.98
SSX4O60224 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.18■□□□□ 0.98
SSX4O60224 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SSX4O60224 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SSX4O60224 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSX4O60224 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SSX4O60224 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSX4O60224 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.17■□□□□ 0.98
SSX4O60224 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSX4O60224 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SSX4O60224 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSX4O60224 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSX4O60224 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSX4O60224 AL359258.2-201ENST00000564063 1566 ntBASIC21.16■□□□□ 0.98
SSX4O60224 AC007029.1-201ENST00000604183 313 ntBASIC21.16■□□□□ 0.98
SSX4O60224 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSX4O60224 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SSX4O60224 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSX4O60224 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSX4O60224 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSX4O60224 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSX4O60224 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSX4O60224 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SSX4O60224 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSX4O60224 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.15■□□□□ 0.98
SSX4O60224 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSX4O60224 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.15■□□□□ 0.98
SSX4O60224 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSX4O60224 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSX4O60224 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.15■□□□□ 0.98
SSX4O60224 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.15■□□□□ 0.98
SSX4O60224 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SSX4O60224 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.14■□□□□ 0.98
SSX4O60224 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SSX4O60224 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SSX4O60224 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSX4O60224 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.14■□□□□ 0.97
SSX4O60224 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSX4O60224 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.14■□□□□ 0.97
SSX4O60224 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.14■□□□□ 0.97
SSX4O60224 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SSX4O60224 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSX4O60224 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSX4O60224 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.14■□□□□ 0.97
SSX4O60224 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSX4O60224 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.13■□□□□ 0.97
SSX4O60224 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SSX4O60224 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSX4O60224 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSX4O60224 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SSX4O60224 SMPD5-203ENST00000639008 1464 ntBASIC21.13■□□□□ 0.97
SSX4O60224 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSX4O60224 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSX4O60224 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SSX4O60224 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SSX4O60224 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSX4O60224 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSX4O60224 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSX4O60224 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SSX4O60224 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSX4O60224 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSX4O60224 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SSX4O60224 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.12■□□□□ 0.97
SSX4O60224 AC133552.2-201ENST00000619106 1032 ntBASIC21.12■□□□□ 0.97
SSX4O60224 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSX4O60224 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSX4O60224 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.11■□□□□ 0.97
SSX4O60224 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SSX4O60224 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSX4O60224 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSX4O60224 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.11■□□□□ 0.97
SSX4O60224 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSX4O60224 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SSX4O60224 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SSX4O60224 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.1■□□□□ 0.97
SSX4O60224 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.1■□□□□ 0.97
SSX4O60224 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSX4O60224 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SSX4O60224 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SSX4O60224 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSX4O60224 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSX4O60224 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSX4O60224 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSX4O60224 AL592293.1-201ENST00000502889 1188 ntBASIC21.09■□□□□ 0.97
SSX4O60224 DUX4L18-201ENST00000553347 1267 ntBASIC21.09■□□□□ 0.97
SSX4O60224 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.09■□□□□ 0.97
SSX4O60224 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SSX4O60224 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SSX4O60224 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSX4O60224 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSX4O60224 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SSX4O60224 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSX4O60224 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SSX4O60224 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.08■□□□□ 0.97
SSX4O60224 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSX4O60224 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.08■□□□□ 0.97
SSX4O60224 AC009831.1-201ENST00000580420 1582 ntBASIC21.08■□□□□ 0.97
SSX4O60224 AC129492.7-201ENST00000622992 756 ntBASIC21.08■□□□□ 0.97
SSX4O60224 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms