Protein–RNA interactions for Protein: A0A0J9YXQ4

PNMA6E, Paraneoplastic antigen Ma6E, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6EA0A0J9YXQ4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC29.48■■■□□ 2.31
PNMA6EA0A0J9YXQ4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PNMA6EA0A0J9YXQ4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC29.48■■■□□ 2.31
PNMA6EA0A0J9YXQ4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PNMA6EA0A0J9YXQ4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC29.47■■■□□ 2.31
PNMA6EA0A0J9YXQ4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC29.47■■■□□ 2.31
PNMA6EA0A0J9YXQ4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PNMA6EA0A0J9YXQ4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
PNMA6EA0A0J9YXQ4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC29.47■■■□□ 2.31
PNMA6EA0A0J9YXQ4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PNMA6EA0A0J9YXQ4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
PNMA6EA0A0J9YXQ4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
PNMA6EA0A0J9YXQ4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
PNMA6EA0A0J9YXQ4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
PNMA6EA0A0J9YXQ4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PNMA6EA0A0J9YXQ4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC29.46■■■□□ 2.31
PNMA6EA0A0J9YXQ4 KRT8P33-201ENST00000508125 1423 ntBASIC29.45■■■□□ 2.31
PNMA6EA0A0J9YXQ4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
PNMA6EA0A0J9YXQ4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
PNMA6EA0A0J9YXQ4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.3
PNMA6EA0A0J9YXQ4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PNMA6EA0A0J9YXQ4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
PNMA6EA0A0J9YXQ4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
PNMA6EA0A0J9YXQ4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC29.44■■■□□ 2.3
PNMA6EA0A0J9YXQ4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
PNMA6EA0A0J9YXQ4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC29.44■■■□□ 2.3
PNMA6EA0A0J9YXQ4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC29.44■■■□□ 2.3
PNMA6EA0A0J9YXQ4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PNMA6EA0A0J9YXQ4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PNMA6EA0A0J9YXQ4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PNMA6EA0A0J9YXQ4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PNMA6EA0A0J9YXQ4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PNMA6EA0A0J9YXQ4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
PNMA6EA0A0J9YXQ4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PNMA6EA0A0J9YXQ4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC29.42■■■□□ 2.3
PNMA6EA0A0J9YXQ4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC29.42■■■□□ 2.3
PNMA6EA0A0J9YXQ4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
PNMA6EA0A0J9YXQ4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
PNMA6EA0A0J9YXQ4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PNMA6EA0A0J9YXQ4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC29.41■■■□□ 2.3
PNMA6EA0A0J9YXQ4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
PNMA6EA0A0J9YXQ4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC29.41■■■□□ 2.3
PNMA6EA0A0J9YXQ4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
PNMA6EA0A0J9YXQ4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PNMA6EA0A0J9YXQ4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC29.41■■■□□ 2.3
PNMA6EA0A0J9YXQ4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PNMA6EA0A0J9YXQ4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PNMA6EA0A0J9YXQ4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC29.4■■■□□ 2.3
PNMA6EA0A0J9YXQ4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC29.4■■■□□ 2.3
PNMA6EA0A0J9YXQ4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC29.4■■■□□ 2.3
PNMA6EA0A0J9YXQ4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PNMA6EA0A0J9YXQ4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC29.4■■■□□ 2.3
PNMA6EA0A0J9YXQ4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
PNMA6EA0A0J9YXQ4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PNMA6EA0A0J9YXQ4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PNMA6EA0A0J9YXQ4 RARRES2P1-201ENST00000474487 481 ntBASIC29.4■■■□□ 2.3
PNMA6EA0A0J9YXQ4 MIR4508-201ENST00000584178 70 ntBASIC29.4■■■□□ 2.3
PNMA6EA0A0J9YXQ4 AC022211.4-201ENST00000625094 2161 ntBASIC29.4■■■□□ 2.3
PNMA6EA0A0J9YXQ4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC29.4■■■□□ 2.3
PNMA6EA0A0J9YXQ4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
PNMA6EA0A0J9YXQ4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
PNMA6EA0A0J9YXQ4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
PNMA6EA0A0J9YXQ4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
PNMA6EA0A0J9YXQ4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29.39■■■□□ 2.3
PNMA6EA0A0J9YXQ4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
PNMA6EA0A0J9YXQ4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC29.39■■■□□ 2.3
PNMA6EA0A0J9YXQ4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
PNMA6EA0A0J9YXQ4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
PNMA6EA0A0J9YXQ4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
PNMA6EA0A0J9YXQ4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC29.38■■■□□ 2.29
PNMA6EA0A0J9YXQ4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
PNMA6EA0A0J9YXQ4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
PNMA6EA0A0J9YXQ4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
PNMA6EA0A0J9YXQ4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
PNMA6EA0A0J9YXQ4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
PNMA6EA0A0J9YXQ4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
PNMA6EA0A0J9YXQ4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PNMA6EA0A0J9YXQ4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
PNMA6EA0A0J9YXQ4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC29.37■■■□□ 2.29
PNMA6EA0A0J9YXQ4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC29.37■■■□□ 2.29
PNMA6EA0A0J9YXQ4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PNMA6EA0A0J9YXQ4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
PNMA6EA0A0J9YXQ4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PNMA6EA0A0J9YXQ4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
PNMA6EA0A0J9YXQ4 AL592295.1-201ENST00000400984 884 ntBASIC29.36■■■□□ 2.29
PNMA6EA0A0J9YXQ4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC29.35■■■□□ 2.29
PNMA6EA0A0J9YXQ4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PNMA6EA0A0J9YXQ4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PNMA6EA0A0J9YXQ4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PNMA6EA0A0J9YXQ4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PNMA6EA0A0J9YXQ4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PNMA6EA0A0J9YXQ4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PNMA6EA0A0J9YXQ4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PNMA6EA0A0J9YXQ4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC29.33■■■□□ 2.29
PNMA6EA0A0J9YXQ4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC29.33■■■□□ 2.29
PNMA6EA0A0J9YXQ4 AC103724.3-201ENST00000564481 992 ntBASIC29.33■■■□□ 2.29
PNMA6EA0A0J9YXQ4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
PNMA6EA0A0J9YXQ4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
PNMA6EA0A0J9YXQ4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PNMA6EA0A0J9YXQ4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms