Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TRAV5A0A0B4J249 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV5A0A0B4J249 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV5A0A0B4J249 AC126177.7-201ENST00000547904 679 ntBASIC18.27■□□□□ 0.52
TRAV5A0A0B4J249 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV5A0A0B4J249 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV5A0A0B4J249 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV5A0A0B4J249 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV5A0A0B4J249 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.27■□□□□ 0.51
TRAV5A0A0B4J249 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV5A0A0B4J249 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.27■□□□□ 0.51
TRAV5A0A0B4J249 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TRAV5A0A0B4J249 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV5A0A0B4J249 ZNRF2P2-203ENST00000454624 420 ntBASIC18.26■□□□□ 0.51
TRAV5A0A0B4J249 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV5A0A0B4J249 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV5A0A0B4J249 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV5A0A0B4J249 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV5A0A0B4J249 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV5A0A0B4J249 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV5A0A0B4J249 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAV5A0A0B4J249 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.26■□□□□ 0.51
TRAV5A0A0B4J249 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAV5A0A0B4J249 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV5A0A0B4J249 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV5A0A0B4J249 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRAV5A0A0B4J249 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV5A0A0B4J249 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRAV5A0A0B4J249 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV5A0A0B4J249 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV5A0A0B4J249 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV5A0A0B4J249 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRAV5A0A0B4J249 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV5A0A0B4J249 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV5A0A0B4J249 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV5A0A0B4J249 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV5A0A0B4J249 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV5A0A0B4J249 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV5A0A0B4J249 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV5A0A0B4J249 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV5A0A0B4J249 AC068473.5-201ENST00000616428 2072 ntBASIC18.24■□□□□ 0.51
TRAV5A0A0B4J249 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV5A0A0B4J249 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV5A0A0B4J249 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAV5A0A0B4J249 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV5A0A0B4J249 AC141586.4-201ENST00000624558 1573 ntBASIC18.24■□□□□ 0.51
TRAV5A0A0B4J249 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV5A0A0B4J249 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRAV5A0A0B4J249 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV5A0A0B4J249 AC004812.2-201ENST00000611079 2094 ntBASIC18.24■□□□□ 0.51
TRAV5A0A0B4J249 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TRAV5A0A0B4J249 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV5A0A0B4J249 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV5A0A0B4J249 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV5A0A0B4J249 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV5A0A0B4J249 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV5A0A0B4J249 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV5A0A0B4J249 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV5A0A0B4J249 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRAV5A0A0B4J249 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV5A0A0B4J249 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV5A0A0B4J249 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV5A0A0B4J249 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 CR559946.2-201ENST00000623684 991 ntBASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV5A0A0B4J249 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV5A0A0B4J249 AC012676.1-201ENST00000574705 1949 ntBASIC18.21■□□□□ 0.51
TRAV5A0A0B4J249 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV5A0A0B4J249 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV5A0A0B4J249 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV5A0A0B4J249 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAV5A0A0B4J249 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV5A0A0B4J249 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV5A0A0B4J249 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV5A0A0B4J249 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV5A0A0B4J249 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV5A0A0B4J249 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRAV5A0A0B4J249 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV5A0A0B4J249 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV5A0A0B4J249 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRAV5A0A0B4J249 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV5A0A0B4J249 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.2■□□□□ 0.5
TRAV5A0A0B4J249 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRAV5A0A0B4J249 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV5A0A0B4J249 ABCB10P4-201ENST00000566803 2184 ntBASIC18.2■□□□□ 0.5
TRAV5A0A0B4J249 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms