Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRGV5A0A0B4J1U4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TRGV5A0A0B4J1U4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRGV5A0A0B4J1U4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRGV5A0A0B4J1U4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRGV5A0A0B4J1U4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRGV5A0A0B4J1U4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TRGV5A0A0B4J1U4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.3■■□□□ 1
TRGV5A0A0B4J1U4 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.3■■□□□ 1
TRGV5A0A0B4J1U4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRGV5A0A0B4J1U4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRGV5A0A0B4J1U4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.29■■□□□ 1
TRGV5A0A0B4J1U4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.29■■□□□ 1
TRGV5A0A0B4J1U4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.29■■□□□ 1
TRGV5A0A0B4J1U4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TRGV5A0A0B4J1U4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRGV5A0A0B4J1U4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.29■■□□□ 1
TRGV5A0A0B4J1U4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TRGV5A0A0B4J1U4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRGV5A0A0B4J1U4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.29■■□□□ 1
TRGV5A0A0B4J1U4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRGV5A0A0B4J1U4 AC092803.2-201ENST00000564287 1899 ntBASIC21.28■■□□□ 1
TRGV5A0A0B4J1U4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRGV5A0A0B4J1U4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRGV5A0A0B4J1U4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRGV5A0A0B4J1U4 AC021242.3-201ENST00000607598 1377 ntBASIC21.28■■□□□ 1
TRGV5A0A0B4J1U4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRGV5A0A0B4J1U4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.28■■□□□ 1
TRGV5A0A0B4J1U4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRGV5A0A0B4J1U4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRGV5A0A0B4J1U4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TRGV5A0A0B4J1U4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.27■■□□□ 1
TRGV5A0A0B4J1U4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRGV5A0A0B4J1U4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TRGV5A0A0B4J1U4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRGV5A0A0B4J1U4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TRGV5A0A0B4J1U4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.27■■□□□ 1
TRGV5A0A0B4J1U4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TRGV5A0A0B4J1U4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.27■■□□□ 1
TRGV5A0A0B4J1U4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRGV5A0A0B4J1U4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRGV5A0A0B4J1U4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.26■□□□□ 0.99
TRGV5A0A0B4J1U4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRGV5A0A0B4J1U4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRGV5A0A0B4J1U4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.26■□□□□ 0.99
TRGV5A0A0B4J1U4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
TRGV5A0A0B4J1U4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRGV5A0A0B4J1U4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.25■□□□□ 0.99
TRGV5A0A0B4J1U4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRGV5A0A0B4J1U4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.25■□□□□ 0.99
TRGV5A0A0B4J1U4 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.25■□□□□ 0.99
TRGV5A0A0B4J1U4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TRGV5A0A0B4J1U4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRGV5A0A0B4J1U4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRGV5A0A0B4J1U4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRGV5A0A0B4J1U4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRGV5A0A0B4J1U4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRGV5A0A0B4J1U4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRGV5A0A0B4J1U4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.24■□□□□ 0.99
TRGV5A0A0B4J1U4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRGV5A0A0B4J1U4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.24■□□□□ 0.99
TRGV5A0A0B4J1U4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.24■□□□□ 0.99
TRGV5A0A0B4J1U4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TRGV5A0A0B4J1U4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRGV5A0A0B4J1U4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRGV5A0A0B4J1U4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRGV5A0A0B4J1U4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRGV5A0A0B4J1U4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.23■□□□□ 0.99
TRGV5A0A0B4J1U4 TSPY9P-201ENST00000440215 945 ntBASIC21.23■□□□□ 0.99
TRGV5A0A0B4J1U4 TSPY11P-201ENST00000442607 1045 ntBASIC21.23■□□□□ 0.99
TRGV5A0A0B4J1U4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRGV5A0A0B4J1U4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.23■□□□□ 0.99
TRGV5A0A0B4J1U4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.23■□□□□ 0.99
TRGV5A0A0B4J1U4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.23■□□□□ 0.99
TRGV5A0A0B4J1U4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.22■□□□□ 0.99
TRGV5A0A0B4J1U4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRGV5A0A0B4J1U4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRGV5A0A0B4J1U4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.22■□□□□ 0.99
TRGV5A0A0B4J1U4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRGV5A0A0B4J1U4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.22■□□□□ 0.99
TRGV5A0A0B4J1U4 UNC93B8-201ENST00000511903 705 ntBASIC21.22■□□□□ 0.99
TRGV5A0A0B4J1U4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRGV5A0A0B4J1U4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRGV5A0A0B4J1U4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRGV5A0A0B4J1U4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRGV5A0A0B4J1U4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRGV5A0A0B4J1U4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRGV5A0A0B4J1U4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRGV5A0A0B4J1U4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRGV5A0A0B4J1U4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.21■□□□□ 0.99
TRGV5A0A0B4J1U4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.21■□□□□ 0.99
TRGV5A0A0B4J1U4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
TRGV5A0A0B4J1U4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TRGV5A0A0B4J1U4 KRT16P3-201ENST00000439127 1283 ntBASIC21.21■□□□□ 0.99
TRGV5A0A0B4J1U4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.21■□□□□ 0.99
TRGV5A0A0B4J1U4 AC092028.1-203ENST00000608262 953 ntBASIC21.21■□□□□ 0.99
TRGV5A0A0B4J1U4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRGV5A0A0B4J1U4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.99
TRGV5A0A0B4J1U4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRGV5A0A0B4J1U4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms