Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV18A0A075B6X5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV18A0A075B6X5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRAV18A0A075B6X5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV18A0A075B6X5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV18A0A075B6X5 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV18A0A075B6X5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV18A0A075B6X5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV18A0A075B6X5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV18A0A075B6X5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV18A0A075B6X5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV18A0A075B6X5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV18A0A075B6X5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV18A0A075B6X5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
TRAV18A0A075B6X5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAV18A0A075B6X5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV18A0A075B6X5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV18A0A075B6X5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRAV18A0A075B6X5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAV18A0A075B6X5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV18A0A075B6X5 AC004812.2-201ENST00000611079 2094 ntBASIC20.18■□□□□ 0.82
TRAV18A0A075B6X5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV18A0A075B6X5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRAV18A0A075B6X5 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV18A0A075B6X5 AC079834.2-201ENST00000609776 1949 ntBASIC20.17■□□□□ 0.82
TRAV18A0A075B6X5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV18A0A075B6X5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV18A0A075B6X5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.17■□□□□ 0.82
TRAV18A0A075B6X5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.17■□□□□ 0.82
TRAV18A0A075B6X5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV18A0A075B6X5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV18A0A075B6X5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 DUX4L13-201ENST00000554103 1267 ntBASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 DUX4L15-201ENST00000611059 1267 ntBASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 DUX4L23-201ENST00000615195 1269 ntBASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 DUX4L24-201ENST00000617576 1269 ntBASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 DUX4L22-201ENST00000618238 1269 ntBASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 DUX4L20-201ENST00000619712 1269 ntBASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 DUX4L21-201ENST00000622058 1269 ntBASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 DUX4L10-201ENST00000622460 1267 ntBASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 DUX4L25-201ENST00000624915 1269 ntBASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TRAV18A0A075B6X5 LINC01971-201ENST00000617888 1048 ntBASIC20.15■□□□□ 0.82
TRAV18A0A075B6X5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TRAV18A0A075B6X5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.15■□□□□ 0.82
TRAV18A0A075B6X5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TRAV18A0A075B6X5 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV18A0A075B6X5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV18A0A075B6X5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.14■□□□□ 0.81
TRAV18A0A075B6X5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV18A0A075B6X5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV18A0A075B6X5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV18A0A075B6X5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAV18A0A075B6X5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV18A0A075B6X5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV18A0A075B6X5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TRAV18A0A075B6X5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV18A0A075B6X5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRAV18A0A075B6X5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TRAV18A0A075B6X5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV18A0A075B6X5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV18A0A075B6X5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.13■□□□□ 0.81
TRAV18A0A075B6X5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV18A0A075B6X5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV18A0A075B6X5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV18A0A075B6X5 ABCB10P4-201ENST00000566803 2184 ntBASIC20.12■□□□□ 0.81
TRAV18A0A075B6X5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV18A0A075B6X5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV18A0A075B6X5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV18A0A075B6X5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV18A0A075B6X5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV18A0A075B6X5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.12■□□□□ 0.81
TRAV18A0A075B6X5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV18A0A075B6X5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV18A0A075B6X5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TRAV18A0A075B6X5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
TRAV18A0A075B6X5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV18A0A075B6X5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV18A0A075B6X5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAV18A0A075B6X5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV18A0A075B6X5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms