Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 DOC2GP-202ENST00000514950 1163 ntBASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 AL365330.1-201ENST00000607459 531 ntBASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 AL596257.1-201ENST00000641463 2694 ntBASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1G3Q9Y6M4 PCDHA14-201ENST00000506751 2298 ntBASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 LINC01144-201ENST00000626198 1710 ntBASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 AC018695.7-201ENST00000624587 2492 ntBASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 AC044860.1-202ENST00000559481 777 ntBASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 AC104794.3-201ENST00000566840 1248 ntBASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.85■□□□□ 0.13
CSNK1G3Q9Y6M4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 PCGF3-213ENST00000620529 1899 ntBASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 MEP1AP4-201ENST00000423244 1087 ntBASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms