Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 PCDHB17P-201ENST00000539533 2393 ntBASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 PP12613-201ENST00000424958 2230 ntBASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 AC138028.6-201ENST00000616106 1482 ntBASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 C2orf27AP3-201ENST00000434123 579 ntBASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 LDHBP1-201ENST00000455730 1119 ntBASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 VDAC1P7-201ENST00000462417 847 ntBASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 AL354718.3-201ENST00000616414 581 ntBASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 CR382287.1-201ENST00000623954 586 ntBASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCH2Q9Y6C5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 AZGP1P1-201ENST00000411909 902 ntBASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 BTBD6P1-201ENST00000412176 1267 ntBASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 CNN2P8-201ENST00000421872 913 ntBASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 HIST2H2BC-201ENST00000498492 580 ntBASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 AL139011.1-202ENST00000642063 584 ntBASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCH2Q9Y6C5 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTCH2Q9Y6C5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.49
PTCH2Q9Y6C5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.08■□□□□ 0.49
PTCH2Q9Y6C5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTCH2Q9Y6C5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTCH2Q9Y6C5 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTCH2Q9Y6C5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTCH2Q9Y6C5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTCH2Q9Y6C5 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
PTCH2Q9Y6C5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.08■□□□□ 0.48
PTCH2Q9Y6C5 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.08■□□□□ 0.48
PTCH2Q9Y6C5 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC18.08■□□□□ 0.48
PTCH2Q9Y6C5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTCH2Q9Y6C5 MIR4321-201ENST00000592276 80 ntBASIC18.08■□□□□ 0.48
PTCH2Q9Y6C5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTCH2Q9Y6C5 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PTCH2Q9Y6C5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTCH2Q9Y6C5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.08■□□□□ 0.48
PTCH2Q9Y6C5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTCH2Q9Y6C5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.08■□□□□ 0.48
PTCH2Q9Y6C5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PTCH2Q9Y6C5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTCH2Q9Y6C5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 AL031731.1-201ENST00000642131 2094 ntBASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 AC253536.4-201ENST00000440539 267 ntBASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms