Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 AC098859.1-201ENST00000502915 1238 ntBASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 MIR4453-201ENST00000584019 89 ntBASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 AC018529.1-201ENST00000613063 361 ntBASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.14■□□□□ 0.49
COL4A3BPQ9Y5P4 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 AL589702.1-201ENST00000641229 1509 ntBASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 AC008741.2-201ENST00000612792 3115 ntBASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 FAM220BP-201ENST00000377689 816 ntBASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 AL390955.2-201ENST00000603032 514 ntBASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A3BPQ9Y5P4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 MIR943-201ENST00000401286 94 ntBASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 AC140878.1-201ENST00000565277 250 ntBASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A3BPQ9Y5P4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.11■□□□□ 0.49
COL4A3BPQ9Y5P4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL4A3BPQ9Y5P4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms