Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA1Q9Y5H4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 AL391256.1-201ENST00000443260 1855 ntBASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 AC018665.1-201ENST00000622927 1362 ntBASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 RN7SL399P-201ENST00000471648 279 ntBASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 AC036164.1-201ENST00000570544 333 ntBASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 AL365330.1-201ENST00000607459 531 ntBASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGA1Q9Y5H4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA1Q9Y5H4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.52■□□□□ 0.07
PCDHGA1Q9Y5H4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.07
PCDHGA1Q9Y5H4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PCDHGA1Q9Y5H4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA1Q9Y5H4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA1Q9Y5H4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDHGA1Q9Y5H4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 Z97205.2-201ENST00000564697 1639 ntBASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 TUBB1P2-201ENST00000422712 1306 ntBASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 TUBB1P1-201ENST00000503144 1300 ntBASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 KLF2P4-201ENST00000451959 1225 ntBASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 SLC25A47P1-201ENST00000531577 414 ntBASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 AL583810.1-201ENST00000553344 1045 ntBASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA1Q9Y5H4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms